sync: upstream f0e1174 - #37
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Assembled as
0.7-nh13.dev+3d10d42on upstreamf0e1174.Merged: ops-distro, ll-affine-reassoc, ksw2-extension-kernels, single-copy-parser, index-threads-v2, extd2-avx512, inline-appenders, parallel-encode, meth-cleanups, meth-sam-tags, soft-clip-penalty, submem-ablation, alt-liftgroup
Dropped: none
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