lazy load imports - #374
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EU: Add scool format (#56)
- Add support for prefixing calls to HTCondor binaries to the HTCondor runner - Define an optional parameter `prefix` for the HTCondor job runner that prepends the parameter value to all calls to HTCondor binaries, such as `condor_submit`, `condor_rm` or `condor_ssh_to_job`. - Add support for overriding HTCondor commands to the HTCondor runner - Define three optional parameters `condor_rm_cmd`, `condor_ssh_to_job_cmd`, `condor_submit_cmd` that override calls to `condor_rm`, `condor_ssh_to_job` and `condor_submit` with the parameters' values. - In addition, the runner now invokes the commands through a shell. This allows tricks such as passing the `condor_*` invocations as arguments to other commands, or performing other tasks before the calls. - Fix `condor_submit` and `condor_stop` docstrings - Update HTCondor runner documentation - Make it clear that the `prefix` is followed by the command without any spaces in between, and thus adding a trailing space to `prefix` is recommended.
This seems to break NFS setups. usegalaxy-eu/issues#552
* Refactor error detection command in XML * Fix chown command in interactivetool_cellprofiler.xml * Update chown command to avoid failure Change ownership command to not fail if it encounters an error. * Change chown command to ignore errors * Modify chown command to prevent errors
* Refactor error detection command in XML * Fix chown command in interactivetool_cellprofiler.xml * Update chown command to avoid failure Change ownership command to not fail if it encounters an error. * Change chown command to ignore errors * Modify chown command to prevent errors * Fix chown command and remove unnecessary chaining * Fix command chaining in interactivetool_anylabeling.xml
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