H&E ROI-Level and WSI-Level Nuclei Segmentation with HoVer-Net
PyPathomics is an open-source software for gigapixel whole-slide image analysis. Extract features directly from HoverNet's json file.
compact version of the official hovernet impl in pytorch
PUMA Challenge 2024 Track 2 — 2-stage panoptic segmentation for melanoma WSI. Stage 1: UnifiedPanopticNet (ViT-L/16 UNI + ConvNeXt-Atto) for 5-class tissue seg & nuclei instance detection (HV maps + watershed). Stage 2: NucleiRefinerUNet for refined 10-class nuclei classification. Site classifier, SC-DFA, Bayesian spatial priors.
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