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Steinegger Lab

Steinegger Lab Github repositories

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  1. foldseek foldseek Public

    Foldseek enables fast and sensitive comparisons of large structure sets.

    C 1.3k 159

  2. foldcomp foldcomp Public

    Compressing protein structures effectively with torsion angles

    C++ 196 25

  3. Metabuli Metabuli Public

    Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.

    C++ 185 17

  4. foldmason foldmason Public

    Multiple Protein Structure Alignment at Scale with FoldMason

    C 282 31

  5. folddisco folddisco Public

    Fast indexing and search of discontinuous motifs in protein structures

    Rust 216 26

  6. riboseek riboseek Public

    RNA search

    C 52 4

Repositories

Showing 10 of 39 repositories
  • riboseek Public

    RNA search

    steineggerlab/riboseek's past year of commit activity
    C 52 MIT 4 1 1 Updated Sep 17, 2026
  • alphafold Public Forked from google-deepmind/alphafold

    Open source code for AlphaFold.

    steineggerlab/alphafold's past year of commit activity
    Python 12 Apache-2.0 2,988 0 2 Updated Sep 14, 2026
  • foldseek-interface-analysis Public

    Analysis script for foldseek interface

    steineggerlab/foldseek-interface-analysis's past year of commit activity
    Jupyter Notebook 6 0 0 0 Updated Sep 10, 2026
  • foldseek Public

    Foldseek enables fast and sensitive comparisons of large structure sets.

    steineggerlab/foldseek's past year of commit activity
    C 1,296 GPL-3.0 159 182 5 Updated Sep 9, 2026
  • Metabuli Public

    Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.

    steineggerlab/Metabuli's past year of commit activity
    C++ 185 GPL-3.0 17 40 0 Updated Sep 9, 2026
  • foldcomp Public

    Compressing protein structures effectively with torsion angles

    steineggerlab/foldcomp's past year of commit activity
    C++ 196 MIT 25 30 (5 issues need help) 0 Updated Sep 7, 2026
  • StrucTTY Public

    An Interactive, Terminal-Native Protein Structure Viewer

    steineggerlab/StrucTTY's past year of commit activity
    C++ 29 MIT 3 0 0 Updated Sep 2, 2026
  • bfvd-analysis Public

    Big Fantastic Virus Database (BFVD): Code used for analyses

    steineggerlab/bfvd-analysis's past year of commit activity
    Shell 2 0 1 0 Updated Aug 24, 2026
  • foldseek-regression Public

    Regression test for foldseek

    steineggerlab/foldseek-regression's past year of commit activity
    Shell 3 6 0 0 Updated Aug 20, 2026
  • steineggerlab/afesm-analysis's past year of commit activity
    Jupyter Notebook 4 2 0 0 Updated Aug 7, 2026