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To see all available qualifiers, see our documentation.
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Many pages on PEGR are customizable:
Define these modules in Admin -> Pipeline as a list, e.g. ["moduleGelImage","moduleSampleMetadata","moduleFastqc"].
Currently, the following modules are available:
Home
What is PEGR?
Configurations
Deployment
CI Logon
Authentication and authorization
Admin
Projects
Sample submission form
Re-assign cohort to another project
Kicking off analysis pipeline
PEGR communication with NGS preprocessing scripts
Analysis workflow tracking and quality control dashboard
PEGR-Galaxy workflow
Sequencing reports
Modularized reports
Synchronize database
Server maintenance