Adding parallelization to fit_uv - #6
Open
nickstarform wants to merge 3 commits into
Open
Conversation
When calling gaussian_model, you can do ```py ... ncores = 10 # of processes to start, usually 2x the number of physical cores uv.fit_models(..., ncores=ncores) ``` This will greatly speed up the fit_models. For simple 1-2 gaussians it doesn't make too much difference but 4 gaussians, the fits were taking >10 hours This still isn't the most efficient as at the start of the cycle all the cores specified are used and then at end of every cycle you will have most of the cores waiting on just a couple to finish, but the bottleneck is now at dynesty implementation of MP.
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
When calling gaussian_model, you can do
This will greatly speed up the fit_models. For simple 1-2 gaussians it doesn't make too much difference but 4 gaussians, the fits were taking >10 hours
This still isn't the most efficient as at the start of the cycle all the cores specified are used and then at end of every cycle you will have most of the cores waiting on just a couple to finish, but the bottleneck is now at dynesty implementation of MP.