Repository navigation

Split one SpatialData store across GPUs in run_inference_flash.py, add SLURM scripts - #28

Open

rushin682 wants to merge 4 commits into

mainfrom

worktree-lightning-sharded-inference

Open

Split one SpatialData store across GPUs in run_inference_flash.py, add SLURM scripts#28
rushin682 wants to merge 4 commits into
mainfrom
worktree-lightning-sharded-inference

Commits on Oct 10, 2026
- Split one SpatialData store across GPUs in run_inference_flash.py
  rushin682
  committed
  1d93b38
Commits on Oct 17, 2026
- Add SLURM batch scripts for single-GPU and DDP inference
  rushin682
  committed
  3862b68
- Explain tqdm log buffering under srun in run_inference_flash.py
  rushin682
  committed
  a65a975
Commits on Oct 18, 2026
- Treat visium stores like H&E stores for the pixel size and array-split the DDP sbatch
  rushin682
  committed
  8308974