Repositories list

• github-test-repo

  Public
  00 forks•00 stars•8383 issues•00 pull requests•Updated Sep 26, 2026Sep 26, 2026

• PharmCAT

  Public
  The Pharmacogenomic Clinical Annotation Tool

  bioinformaticsvcfpharmacogenomics+ 2

  bioinformaticsvcfpharmacogenomicshaplotypecallerhaplotype-mapping

  Java

  •

  Mozilla Public License 2.0

  •6262 forks•192192 stars•3131 issues•22 pull requests•Updated Sep 25, 2026Sep 25, 2026

• pgkb-common

  Public
  Common code shared among all PharmGKB projects.

  Java

  •

  Mozilla Public License 2.0

  •11 fork•00 stars•00 issues•11 pull request•Updated Sep 9, 2026Sep 9, 2026

• vcf-parser

  Public
  A strict streaming parser for VCF 4.1/4.2.

  Java

  •

  Mozilla Public License 2.0

  •11 fork•99 stars•11 issue•11 pull request•Updated Aug 28, 2026Aug 28, 2026

• pgkb-pathvisio-plugin

  Public
  PathVisio plugin for pharmacogenomics pathway curation (extracted from PharmGKB)

  Java

  •00 forks•00 stars•00 issues•00 pull requests•Updated Aug 28, 2026Aug 28, 2026

• clinpgx-ner

  Public
  Java

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 7, 2026Apr 7, 2026

• pgkb-branding

  Public
  PharmGKB brand resources

  00 forks•33 stars•00 issues•44 pull requests•Updated Aug 27, 2025Aug 27, 2025

• pgkb-ant

  Public
  PharmGKB-specific ant tasks.

  Java

  •

  Mozilla Public License 2.0

  •00 forks•00 stars•00 issues•33 pull requests•Updated Jul 28, 2025Jul 28, 2025

• PharmCAT-tutorial

  Public
  Tutorial materials for the PharmCAT

  Shell

  •

  Mozilla Public License 2.0

  •44 forks•77 stars•11 issue•00 pull requests•Updated Feb 18, 2025Feb 18, 2025

• docker-idrac6

  Public
  iDRAC 6 web interface and VNC proxy

  C

  •

  MIT License

  •178178 forks•00 stars•00 issues•00 pull requests•Updated Nov 26, 2024Nov 26, 2024

• clinpgx-frontend

  Public
  HTML

  •

  Mozilla Public License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Oct 1, 2024Oct 1, 2024

• releasebot

  Public
  Shell

  •

  Mozilla Public License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 26, 2024Mar 26, 2024

• fda-labels-monitored

  Public
  FDA Labels Monitored

  11 fork•11 star•00 issues•00 pull requests•Updated Jan 15, 2024Jan 15, 2024

• pgkb-nightwatch

  Public
  Nightwatch testing repo

  JavaScript

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 22, 2023May 22, 2023

• fda-biomarker

  Public archive
  FDA PGx Biomarker Table parser

  JavaScript

  •00 forks•00 stars•00 issues•11 pull request•Updated Feb 3, 2023Feb 3, 2023

• pgkb-common-io

  Public archive
  Common IO code shared among all PharmGKB projects.

  Java

  •

  Mozilla Public License 2.0

  •00 forks•00 stars•00 issues•99 pull requests•Updated Nov 11, 2022Nov 11, 2022

• PharmCAT-example-reports

  Public archive
  A collection of synthetic PharmCAT reports

  HTML

  •00 forks•11 star•00 issues•00 pull requests•Updated Aug 5, 2022Aug 5, 2022

• interns

  Public
  Python

  •

  Mozilla Public License 2.0

  •11 fork•11 star•00 issues•00 pull requests•Updated Aug 4, 2022Aug 4, 2022

• ncbi-var-services

  Public
  Java wrapper for NCBI Variation API Services

  Java

  •11 fork•11 star•00 issues•22 pull requests•Updated May 20, 2022May 20, 2022

• jenkins-shared-library

  Public
  Groovy

  •

  Mozilla Public License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Aug 9, 2021Aug 9, 2021

• account

  Public
  The African American Cardiovascular Pharmacogenetics CONsorTium

  Java

  •00 forks•00 stars•00 issues•00 pull requests•Updated Aug 5, 2021Aug 5, 2021

• genome-sequence-io

  Public
  Micro-libraries for reading and writing genomic sequence data in various formats.

  Java

  •

  Mozilla Public License 2.0

  •11 fork•00 stars•00 issues•00 pull requests•Updated Feb 22, 2021Feb 22, 2021

• component-incubator

  Public
  Public repo for developing components for use in the PharmGKB website.

  JavaScript

  •

  Mozilla Public License 2.0

  •11 fork•00 stars•44 issues•00 pull requests•Updated Nov 24, 2020Nov 24, 2020

• ICPC

  Public
  International Clopidogrel Pharmacogenomics Consortium

  Java

  •00 forks•11 star•00 issues•00 pull requests•Updated Jul 24, 2020Jul 24, 2020

• pgkb-project-template

  Public
  Template for new public PharmGKB projects.

  Mozilla Public License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jul 1, 2019Jul 1, 2019

• site-consortia

  Public
  Site for PharmGKB-led working groups

  CSS

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 15, 2019Mar 15, 2019

• pgkb-ngs-pipeline

  Public
  PharmGKB NGS Pipeline

  Shell

  •

  Mozilla Public License 2.0

  •66 forks•1919 stars•77 issues•00 pull requests•Updated Oct 2, 2018Oct 2, 2018

• pgkb-clinvar-submission

  Public archive
  PharmGKB ClinVar submission library.

  Java

  •

  Mozilla Public License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Oct 19, 2017Oct 19, 2017

• pgkb-medline

  Public
  Mozilla Public License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 13, 2017Sep 13, 2017

• react-stickynode

  Public
  A performant and comprehensive React sticky component.

  JavaScript

  •

  Other

  •147147 forks•00 stars•00 issues•00 pull requests•Updated Jul 18, 2017Jul 18, 2017