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    6 repositories

    • lrsomatic

      Public
      Workflow for somatic variant calling of long read data
      Nextflow
      •
      MIT License
      •5•31•8•7•Updated Nov 2, 2026Nov 2, 2026

    • lrsinglecell

      Public
      LRSinglecell: single-cell long-read cDNA and DNA pipeline (Oxford Nanopore), derived from nf-core/scnanoseq
      Nextflow
      •
      MIT License
      •0•0•28•0•Updated Oct 31, 2026Oct 31, 2026

    • lrua26_multiomics

      Public
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Oct 30, 2026Oct 30, 2026

    • test-datasets

      Public
      Test datasets used for pipelines
      1•0•0•0•Updated Oct 30, 2026Oct 30, 2026

    • SPLONGGET_analysis

      Public
      The repository with the code used is SPLONGGET paper
      Jupyter Notebook
      •
      MIT License
      •1•3•0•0•Updated Jun 23, 2026Jun 23, 2026

    • scdnalong

      Public
      Pipeline for processing of single-cell long read DNA data. For example data obtained through 10X-style barcoding of DNA and then sequenced on ONT/PacBio machine…
      Nextflow
      •
      MIT License
      •0•3•1•0•Updated Apr 24, 2026Apr 24, 2026
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