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    147 repositories

    • sbp-proteindj

      Public
      Official repository for the ProteinDJ protein design pipeline
      Python
      •
      Other
      •29•0•0•0•Updated Sep 10, 2026Sep 10, 2026

    • sbp-workflow-configs

      Public
      The centralised repository to manage all Structural Biology Platform workflow configurations
      Shell
      •0•1•0•1•Updated Sep 10, 2026Sep 10, 2026

    • sbp-portal

      Public
      TypeScript
      •1•2•0•2•Updated Sep 10, 2026Sep 10, 2026

    • gen3-dataops-toolkit

      Public
      Gen3 DataOps toolkit (g3dt): operate SSM-published Gen3 data pipeline environments
      Python
      •0•1•1•0•Updated Sep 9, 2026Sep 9, 2026

    • sbp-backend

      Public
      Python
      •1•1•0•3•Updated Sep 9, 2026Sep 9, 2026

    • fence

      Public
      AuthN/AuthZ OIDC Service
      Python
      •
      Apache License 2.0
      •47•1•0•0•Updated Sep 9, 2026Sep 9, 2026

    • aws-gen3-pipeline

      Public template
      Config-driven AWS CDK data pipeline for Gen3 data commons (Glue/Athena/dbt/Step Functions)
      bioinformaticsdata-pipelinegen3
      bioinformaticsdata-pipelinegen3aws-cdk
      TypeScript
      •
      Apache License 2.0
      •0•0•1•0•Updated Sep 9, 2026Sep 9, 2026

    • gen3-helm

      Public
      Helm charts for Gen3 Deployments
      Smarty
      •
      Apache License 2.0
      •37•0•0•0•Updated Sep 9, 2026Sep 9, 2026

    • aai-portal

      Public
      TypeScript
      •0•1•0•5•Updated Sep 8, 2026Sep 8, 2026

    • rems-aws-cdk-core

      Public
      This project provisions infrastructure for deploying [REMS](https://github.com/CSCfi/rems) on AWS
      TypeScript
      •0•0•0•0•Updated Sep 6, 2026Sep 6, 2026

    • acdc-schema-json

      Public
      Contains the jsonschema for the Australian Cardiovascular Disease Project
      1•1•1•0•Updated Sep 4, 2026Sep 4, 2026

    • aai-backend

      Public
      The backend library between Auth0 and the AAI portal front end.
      Python
      •0•1•0•2•Updated Sep 4, 2026Sep 4, 2026

    • omix3-commons-frontend-app

      Public template
      Gen3 Data Commons template repository for gen3 frontend framework
      JavaScript
      •
      Apache License 2.0
      •42•1•0•0•Updated Sep 4, 2026Sep 4, 2026

    • heartdata-landing-page

      Public
      Heartdata Gen3 landing page
      TypeScript
      •
      Apache License 2.0
      •0•1•0•0•Updated Sep 2, 2026Sep 2, 2026

    • sbp-bindflow

      Public
      Nextflow
      •
      MIT License
      •2•0•0•0•Updated Sep 2, 2026Sep 2, 2026

    • atol

      Public
      This repository hosts documentation for infrastructure being developed by the Australian Tree of Life Bioinformatics team
      SCSS
      •
      MIT License
      •1•0•2•0•Updated Sep 1, 2026Sep 1, 2026

    • aai-aaf-login-proxy

      Public
      FastAPI proxy service to relay login requests to AAF
      Python
      •0•0•0•0•Updated Aug 31, 2026Aug 31, 2026

    • Community-Library

      Public
      SCSS
      •
      MIT License
      •2•2•6•0•Updated Aug 28, 2026Aug 28, 2026

    • bpsych-gen3-schemadev

      Public
      Gen3 Data Dictionary for BPsych Data Commons
      0•0•0•0•Updated Aug 27, 2026Aug 27, 2026

    • bpsyc-frontend-app

      Public template
      Gen3 Data Commons template repository for gen3 frontend framework
      TypeScript
      •
      Apache License 2.0
      •42•1•0•0•Updated Aug 27, 2026Aug 27, 2026

    • gen3-metadata-simulator

      Public
      Simulate linked, schema-valid Gen3 metadata from a bundled Gen3 JSON schema
      Python
      •0•0•0•0•Updated Aug 27, 2026Aug 27, 2026

    • atol-canopy

      Public
      Python
      •
      GNU General Public License v3.0
      •0•0•21•2•Updated Aug 26, 2026Aug 26, 2026

    • acdc-exploratory-analysis

      Public
      Python
      •0•0•0•0•Updated Aug 25, 2026Aug 25, 2026

    • gen3-metadata

      Public
      User friendly tools for downloading and manipulating gen3 metadata
      R
      •
      Apache License 2.0
      •1•1•1•0•Updated Aug 24, 2026Aug 24, 2026

    • acdc-data-portal

      Public
      Windmill: data portal for metadata submission and query
      JavaScript
      •
      Apache License 2.0
      •63•0•0•0•Updated Aug 24, 2026Aug 24, 2026

    • gen3-dbt-template

      Public template
      Template dbt project (Athena/Iceberg) for the Gen3 AWS data pipeline — the CI/CD source repo that drives its CodePipelines
      Shell
      •0•2•0•0•Updated Aug 21, 2026Aug 21, 2026

    • gen3-metadata-templates

      Public
      Tool to create metadata submission templates from a gen3 json schema.
      Jupyter Notebook
      •
      Apache License 2.0
      •0•0•0•0•Updated Aug 21, 2026Aug 21, 2026

    • gen3schemadev

      Public
      Gen3 Schema Development tools
      gen3
      gen3
      Python
      •
      Apache License 2.0
      •1•2•6•0•Updated Aug 21, 2026Aug 21, 2026

    • nf-gadi

      Public
      Groovy
      •
      Apache License 2.0
      •1•1•0•0•Updated Aug 20, 2026Aug 20, 2026

    • genome-annotation

      Public
      Australian Biocommons Genome Annotation (Apollo)
      Shell
      •3•2•2•0•Updated Aug 19, 2026Aug 19, 2026
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