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Adding hybrid AIGMs - #60

Merged

Achille-V merged 58 commits into

neurodatascience:mainfrom

Achille-V:task_dFC_hybrid

Jul 10, 2026

Merged

Adding hybrid AIGMs#60
Achille-V merged 58 commits into
neurodatascience:mainfrom
Achille-V:task_dFC_hybrid

Commits on Apr 23, 2026
- add validate_dfc
  mtorabi59
  committed
  d103fac
- add new ai generated methods + instructions md
  mtorabi59
  committed
  ca54be2
- add new methods to multi_analysis_utils.py
  mtorabi59
  committed
  3b7e0be
Commits on Apr 24, 2026
- Merge branch 'main' into highthroughput_dFC
  mtorabi59
  committed
  b4e4eff
Commits on Apr 25, 2026
- Merge branch 'task_dFC' into highthroughput_dFC
  mtorabi59
  committed
  af65fc2
Commits on Apr 26, 2026
- Merge branch 'task_dFC' into highthroughput_dFC
  mtorabi59
  committed
  87061ce
Commits on Apr 27, 2026
- Merge branch 'task_dFC' into highthroughput_dFC
  mtorabi59
  committed
  d3de966
- improve name display in dfc_visualization
  mtorabi59
  committed
  205106d
Commits on May 8, 2026
- add generated SB methods
  
  mtorabi59
  and
  Copilot
  committed
  6614e39
Commits on May 16, 2026
- improve hyperparam definition
  mtorabi59
  committed
  f5aa4cb
- minor
  mtorabi59
  committed
  fdd573b
Commits on May 17, 2026
- add auto method detection to multi_analysis_utils
  mtorabi59
  committed
  ea8f350
- change MEASURE_NAME convention, make it class-level
  mtorabi59
  committed
  e61a767
Commits on May 18, 2026
- FCS_proba of new methods fixed
  mtorabi59
  committed
  cbdcc7a
Commits on Jun 2, 2026
- add assess_similarity_fast
  mtorabi59
  committed
  6c50c26
Commits on Jun 3, 2026
- make dFC_mat_lst_similarity faster
  mtorabi59
  committed
  a3fc6fa
Commits on Jun 4, 2026
- reduce quick validation checks to API chekcs
  mtorabi59
  committed
  7f0c898
- add methods generated by Claude Code
  mtorabi59
  committed
  3a45eea
- Add code to compute similarity between methods
  Kini Chen
  committed
  d8b4e10
- Merge branch 'mtorabi59:highthroughput_dFC' into highthroughput_dFC
  kinichen
  authored
  e2120aa
Commits on Jun 8, 2026
- fix python version of CC
  mtorabi59
  committed
  733a554
- minor
  mtorabi59
  committed
  dbb93bb
- minor fix
  mtorabi59
  committed
  53f3b93
- minor fix
  mtorabi59
  committed
  032cf0c
Commits on Jun 9, 2026
- add retry to run_ML
  mtorabi59
  committed
  6fd4400
- add retry for run_dFC and run_FCS
  mtorabi59
  committed
  d886950
Commits on Jun 10, 2026
- improve ml result figures
  mtorabi59
  committed
  d2db4c3
Commits on Jun 12, 2026
- minor
  mtorabi59
  committed
  dad3a58
- minor
  mtorabi59
  committed
  46bbdd2
- minor
  mtorabi59
  committed
  8fdb7c6
- add AIGM vs non-AIGM figure
  mtorabi59
  committed
  1ef5787
- modify AIGM figures
  mtorabi59
  committed
  d4f0335
- modify AIGM non-AIGM figure
  mtorabi59
  committed
  6285159
- add new options for individual perf plot
  mtorabi59
  committed
  4ba2cb0
Commits on Jun 13, 2026
- minor
  mtorabi59
  committed
  cebe04c
- minor
  mtorabi59
  committed
  ff24dd8
- Merge branch 'mtorabi59:highthroughput_dFC' into highthroughput_dFC
  kinichen
  authored
  ba10384
- Add code to compute similarity between methods
  
  Kini Chen
  authored and
  kinichen
  committed
  5164a78
- Add heatmaps and stats for similarity
  kinichen
  committed
  b8c36a7
- Update feature similarity files
  kinichen
  committed
  6efdc22
Commits on Jun 14, 2026
- improve lollipop figure
  mtorabi59
  committed
  c4cff3b
- minor
  mtorabi59
  committed
  3c305c2
- minor
  mtorabi59
  committed
  ab3f5bb
Commits on Jun 25, 2026
- Update feature similarity compute and heatmap details
  kinichen
  committed
  b31d7f8
Commits on Jun 26, 2026
- Merge wrong origin/highthroughput_dFC_local to correct local branch
  kinichen
  committed
  681574d
- Merge branch 'mtorabi59:highthroughput_dFC' into highthroughput_dFC
  kinichen
  authored
  ebc6b31
Commits on Jun 27, 2026
- Merge branch 'neurodatascience:highthroughput_dFC' into highthroughput_dFC
  mtorabi59
  authored
  df5f259
- nmfstates bug
  mtorabi59
  committed
  cc7e881
- update README
  mtorabi59
  committed
  b324d15
- clean similarity scripts
  mtorabi59
  committed
  7b6ab58
- Merge pull request #52 from mtorabi59/highthroughput_dFC
  mtorabi59
  authored
  507c35c
Commits on Jun 28, 2026
- Merge remote-tracking branch 'upstream/highthroughput_dFC' into highthroughput_dFC
  kinichen
  committed
  2c8ec03
- Polish feature heatmaps (subplot) and change BOO algorithm similarity to weighted. Similarity files reorganization to folders
  kinichen
  committed
  494f0fe
Commits on Jun 30, 2026
- Ajout methode combine test
  Achille-V
  committed
  2c7a3d0
- Supprime fichier artefact
  Achille-V
  committed
  088b72c
Commits on Jul 6, 2026
- Merge branch 'task_dFC enter a commit message to explain why this merge is necessary, Update task_dFC
  Achille-V
  committed
  24bd101
Commits on Jul 9, 2026
- Merge pull request #59 from Achille-V/task_dFC
  Achille-V
  authored
  e1b87a2
Commits on Jul 10, 2026
- Adding 30 AIG hybrid methods
  Achille-V
  committed
  8979b02

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