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version bump for CRAN submission CI #209: Commit 05e1516 pushed by kbhoehn
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JSON format edge_tolerance change to adjust for branch length > 1 and… CI #208: Commit 80133b2 pushed by kbhoehn
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filterCombs sequence id bug CI #207: Commit 5ec97ae pushed by kbhoehn
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safe lhood writing for different numpy versions CI #206: Commit 599fc19 pushed by colejensen
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update getDiffPoints output to specify parent_height and child_height… CI #205: Commit 171d196 pushed by kbhoehn
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getDiffPoints update to deal with single value 95% HPD interval bug CI #204: Commit 0c91a53 pushed by kbhoehn
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remove IMGT gene db url CI #203: Commit 583a279 pushed by kbhoehn
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docs udpate CI #202: Commit 64e9b8c pushed by kbhoehn
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getDiffPoints doc update CI #201: Commit 4134287 pushed by kbhoehn
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parallelize dowserObjectEquivalent, make full_posterior=FALSE the def… CI #200: Commit 8e2de11 pushed by kbhoehn
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doc updates, turn off null catch for checkDivergences, and bump version CI #199: Commit a90a5ab pushed by kbhoehn
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also outside params updated CI #198: Commit 609d180 pushed by colejensen
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make lhood easier to report CI #197: Commit e13b746 pushed by colejensen
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UCA now updates germline or equivalent slot CI #196: Commit b024346 pushed by colejensen
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update news CI #195: Commit 2ac5f38 pushed by kbhoehn
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node divergence checks for getNodeSeq. May make for some annoyances w… CI #194: Commit 7fa7a01 pushed by kbhoehn
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readTreesJSON bug fix, use temporary nexus file to ensure time tree t… CI #193: Commit 33215e9 pushed by kbhoehn
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add experimental scaleBranches option to sometimes scale TyCHE trees … CI #192: Commit ddb77e2 pushed by kbhoehn
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add experimental scaleBranches option to sometimes scale TyCHE trees … CI #191: Commit ddb77e2 pushed by kbhoehn
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citation reminders for vignettes, bug fix in dataColumnEqual CI #190: Commit e8f22b8 pushed by kbhoehn
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added llms.txt documents, as well as README updates CI #189: Commit ecff7ab pushed by kbhoehn
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IO doc update CI #188: Commit 8f451f0 pushed by kbhoehn
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added scRepertoire to IO vignette CI #187: Commit 05f4b08 pushed by kbhoehn
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IO vignette update CI #186: Commit a64a9b5 pushed by kbhoehn
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IO vignetee, update exportTrees to work with timetrees CI #185: Commit 4cea431 pushed by kbhoehn
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