iAMB

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1. PAModelpy PAModelpy Public

   Repository for source code of the PAModelpy package

   Jupyter Notebook 5 3

2. Opol-GSMM Opol-GSMM Public

   Genome scale metabolic model for Ogataea polymorpha NCYC495.

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3. Tutorial_GEM_and-_FBA Tutorial_GEM_and-_FBA Public

   Tutorial for simulation of constraint based models with CobraPy.

   Jupyter Notebook 2 1

4. Ustilago_maydis-GEM Ustilago_maydis-GEM Public

   The genome scale metabolic model iUma22 for Ustilago maydis

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5. PathwayToolsAnnotationParser PathwayToolsAnnotationParser Public

   Matlab script that parses files exported from Pathway Tools for common annotations in order to complete models created with the COBRA Toolbox. This script finds those annotations that the COBRA par…

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6. BioLabSim BioLabSim Public

   Jupyter Notebook