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upgrade ruff #9

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Merged
loichuder merged 1 commit into from
Jul 29, 2026
Merged

upgrade ruff #9

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1 change: 0 additions & 1 deletion .gitignore
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Original file line number Diff line number Diff line change
Expand Up @@ -4,7 +4,6 @@
!.github
!.gitlab-ci.yml
!.readthedocs.yaml
!.flake8

# Byte / compiled / optimized
*.py[cod]
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27 changes: 21 additions & 6 deletions pyproject.toml
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Expand Up @@ -30,8 +30,14 @@ Issues = "https://github.com/ewoks-kit/ewoksgalaxy/issues"
Changelog = "https://github.com/ewoks-kit/ewoksgalaxy/blob/main/CHANGELOG.md"

[project.optional-dependencies]
test = ["pytest >=7", "ewoks"]
dev = ["ewoksgalaxy[test]", "ruff"]
test = [
"pytest >=7",
"ewoks"
]
dev = [
"ewoksgalaxy[test]",
"ruff>=0.16.0"
]
doc = [
"ewoksgalaxy[test]",
"sphinx >=4.5",
Expand All @@ -56,15 +62,24 @@ namespaces = false
omit = ["*/tests/*"]

[tool.ruff.lint]
select = ["E", "F", "I", "S"]
ignore = ["E203", "E501", "E701"]
select = [
"E", # pycodestyle errors
"F", # pyflakes
"I", # isort
"S", # flake8-bandit
]
ignore = [
"E501", # line too long
]

[tool.ruff.lint.per-file-ignores]
# Ignore `S101` (assert used violations) in all test files
"*/test_*.py" = ["S101", "S603"]
"*/test_*.py" = [
"S101" # allow asserts
]

[tool.ruff.lint.isort]
force-single-line = true
known-first-party = ["ewoksgalaxy"]

[project.entry-points."ewoks.engines"]
"gxwf" = "ewoksgalaxy.engine:GalaxyWorkflowEngine"
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4 changes: 2 additions & 2 deletions src/ewoksgalaxy/tests/test_engine.py
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Expand Up @@ -10,7 +10,7 @@ def test_convert(ewoks_workflow: dict, tmpdir: Path):
json.dump(ewoks_workflow, f)

output_path = tmpdir / "workflow.yaml"
subprocess.run(
subprocess.run( # noqa: S603
[
sys.executable,
"-m",
Expand All @@ -25,7 +25,7 @@ def test_convert(ewoks_workflow: dict, tmpdir: Path):
)
assert output_path.exists()

subprocess.run(
subprocess.run( # noqa: S603
[sys.executable, "-m", "gxformat2.lint", str(output_path)],
check=True,
)
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