Repository navigation

PROFIT-seq

Public

About

Programmable Full-length Transcriptome Sequencing

Custom properties

5 stars

1 watching

Report repository

Name		Name	Last commit message	Last commit date
PROFIT_seq		PROFIT_seq
app		app
misc		misc
test_data		test_data
.gitignore		.gitignore
LICENSE		LICENSE
Makefile		Makefile
PROFIT-seq.py		PROFIT-seq.py
RCA_adapters.fa		RCA_adapters.fa
README.md		README.md
__init__.py		__init__.py
pyproject.toml		pyproject.toml
requirements.txt		requirements.txt
step1_demultiplex.py		step1_demultiplex.py
step2_consensus.py		step2_consensus.py
step3_analysis.py		step3_analysis.py

Repository files navigation

PROFIT-seq: Targeted and accurate whole transcriptome sequencing in a programmable manner

Programmable full-length isoform transcriptome sequencing

Author

Authors: Jinyang Zhang(zhangjinyang@biols.ac.cn), Fangqing Zhao(zhfq@biols.ac.cn)

Maintainer: Jinyang Zhang

Release Notes

version 1.0: First released version

License

The code is released under the MIT License. See the LICENSE file for more detail

Citing PROFIT-seq

Under submission

Documentation

Please refer to the wiki for detailed usage

About

Programmable Full-length Transcriptome Sequencing

Custom properties

5 stars

1 watching

Report repository

Releases

Used by

Contributors

Languages