Issues

• how to run CloneHD for WES data

  andrej-fischer/cloneHD#26 · Filter by author dhsamp opened on Sep 30, 2020

• simulation data from article

  andrej-fischer/cloneHD#25 · Filter by author Zhanglab-SHT opened on Aug 24, 2018

• clones [file]

  andrej-fischer/cloneHD#24 · Filter by author tenglaowu opened on Aug 23, 2017
  1

• how to create the baf input file

  andrej-fischer/cloneHD#23 · Filter by author tenglaowu opened on Aug 15, 2017

• Maximum total copy number

  andrej-fischer/cloneHD#22 · Filter by author SunDionel opened on Aug 9, 2017

• FilterHD error

  andrej-fischer/cloneHD#18 · Filter by author Alxmertz opened on Aug 22, 2016
  1

• Bug with different number of chromosomes in SNV, mean_tcn and avail_cn files

  andrej-fischer/cloneHD#16 · Filter by author ivazquez opened on Jun 10, 2016

• Location of test data?

  andrej-fischer/cloneHD#13 · Filter by author dg13 opened on Mar 17, 2016
  1

• Inconsistencies between CNA and BAF files

  andrej-fischer/cloneHD#12 · Filter by author amcpherson opened on Apr 3, 2015

• provide description of baf.subclone-1.txt file

  andrej-fischer/cloneHD#11 · Filter by author amcpherson opened on Apr 2, 2015

• Docs unclear wrt CNA file spec

  andrej-fischer/cloneHD#10 · Filter by author amcpherson opened on Apr 1, 2015

• Provide a general makefile

  andrej-fischer/cloneHD#9 · Filter by author amcpherson opened on Apr 1, 2015

• Release builds for v1.17.8 both OSX

  andrej-fischer/cloneHD#8 · Filter by author amcpherson opened on Apr 1, 2015
  4