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aalnawfal1992/README.md
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🧬 About Me

Bioinformatician bridging clinical molecular pathology, computational genomics, and machine learning πŸ‡ΈπŸ‡¦.

  • πŸ”¬ Building reproducible NGS pipelines (Nextflow / Snakemake) for WES, WGS, RNA-Seq & somatic variant calling β€” and validating in-silico tests for clinical use.
  • ☁️ Running production genomic pipelines across AWS & Google Cloud in a clinical genomics setting.
  • πŸŽ“ Completing an M.Sc. in Applied Artificial Intelligence - applying ML & deep learning to genomic and biomedical data.
  • πŸ§ͺ My background blends laboratory medicine, information technology, and artificial intelligence.
  • πŸ’¬ Ask me about Clinical Bioinformatics, NGS pipelines, and AI for genomics.
  • πŸ“« Reach me at a.alnawfal.1992@gmail.com

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πŸ› οΈ Tech Stack

Bioinformatics & Pipelines

Nextflow Snakemake NGS

Machine Learning & AI

Python scikit-learn PyTorch TensorFlow pandas Polars NumPy

Cloud / HPC

AWS Google Cloud SLURM

Languages & Tools

Bash Linux Java Git MySQL

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πŸŽ“ Education

  • M.Sc. Applied Artificial Intelligence β€” Prince Sattam Bin Abdulaziz University (2024–2026)
  • B.Sc. Information Technology β€” Saudi Electronic University (2019–2023)
  • B.Sc. Applied Medical Science β€” Qassim University (2011–2017)

πŸ“š Selected Publications

  • Clinical, molecular, and biochemical delineation of asparagine synthetase deficiency in a Saudi cohort. Genetics in Medicine 22, 2071–2080 (2020). DOI
  • Automating the Computational Analysis of Exome Sequencing Data. J. Computer Science & Systems Biology 12 (2019): 47–52.

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πŸ“Š GitHub Stats

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"Advancing precision medicine through AI-driven pipeline engineering."

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