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Switch logo to red FEBio emblem and add favicon
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Add MathJax macro for undefined \Square symbol in section 4.1
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Convert remaining FEBio Studio Manual chapters (full manual, 117 sect…
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Add FEBio Studio Manual as a second navigation tab (pilot)
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Use the real FEBio logo and bump to FEBio 4.13
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Render Example/Theorem* as plain text instead of admonition boxes
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Fix LaTeX not rendering in Section 5.1's Lame-parameter table
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Simplify preface intro and merge into the following paragraph
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