Skip to content
Merged
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
85 changes: 85 additions & 0 deletions nbed/ham_builder.py
Original file line number Diff line number Diff line change
Expand Up @@ -237,6 +237,23 @@ def build(
logger.info("Building Hamiltonian")
one_body_integrals = self._one_body_integrals
two_body_integrals = self._two_body_integrals
if self.n_frozen_core != 0:
occupied_indices = [*range(0, self.n_frozen_core)]
else:
occupied_indices = []

active_indices = [*range(one_body_integrals.shape[0])]
if self.n_frozen_virt != 0:
active_indices = active_indices[: -self.n_frozen_virt]

core_const, one_body_integrals, two_body_integrals = get_active_space_integrals(
one_body_integrals,
two_body_integrals,
occupied_indices=occupied_indices,
active_indices=active_indices,
)
self.constant_e_shift += core_const

one_body_coefficients, two_body_coefficients = self._spinorb_from_spatial(
one_body_integrals, two_body_integrals
)
Expand Down Expand Up @@ -276,3 +293,71 @@ def reduce_virtuals(scf_method, n_frozen_virt: int) -> scf.hf.SCF:
reduced_scf_method.mo_occ = reduced_scf_method.mo_occ[:-n_frozen_virt] # type: ignore

return reduced_scf_method


def get_active_space_integrals(
one_body_integrals: np.ndarray,
two_body_integrals: np.ndarray,
occupied_indices: list,
active_indices: list,
) -> tuple[float, np.ndarray, np.ndarray]:
"""Restricts a molecule at a spatial orbital level to an active space.

This function is from Openfermion, see additonal documentation there.

This active space may be defined by a list of active indices and
doubly occupied indices. Note that one_body_integrals and
two_body_integrals must be defined
n an orthonormal basis set.

Args:
one_body_integrals: One-body integrals of the target Hamiltonian
two_body_integrals: Two-body integrals of the target Hamiltonian
occupied_indices: A list of spatial orbital indices
indicating which orbitals should be considered doubly occupied.
active_indices: A list of spatial orbital indices indicating
which orbitals should be considered active.

Returns:
tuple: Tuple with the following entries:

**core_constant**: Adjustment to constant shift in Hamiltonian
from integrating out core orbitals

**one_body_integrals_new**: one-electron integrals over active
space.

**two_body_integrals_new**: two-electron integrals over active
space.
"""
# Fix data type for a few edge cases
occupied_indices = [] if occupied_indices is None else occupied_indices
if len(active_indices) < 1:
raise ValueError("Some active indices required for reduction.")

# Determine core constant
core_constant = 0.0
for i in occupied_indices:
core_constant += 2 * one_body_integrals[i, i]
for j in occupied_indices:
core_constant += (
2 * two_body_integrals[i, j, j, i] - two_body_integrals[i, j, i, j]
)

# Modified one electron integrals
one_body_integrals_new = np.copy(one_body_integrals)
for u in active_indices:
for v in active_indices:
for i in occupied_indices:
one_body_integrals_new[u, v] += (
2 * two_body_integrals[i, u, v, i] - two_body_integrals[i, u, i, v]
)

# Restrict integral ranges and change M appropriately
return (
core_constant,
one_body_integrals_new[np.ix_(active_indices, active_indices)],
two_body_integrals[
np.ix_(active_indices, active_indices, active_indices, active_indices)
],
)