Issues

• SciBot does not translate BDSC:### to RRID:BDSC_### properly

  SciCrunch/scibot#41 · Filter by author bandrow opened on Feb 27, 2026

• automatically gzip or zstd the json logs

  SciCrunch/scibot#35 · Filter by author tgbugs opened on Mar 9, 2023

• check whether scibot flags mismatched RRIDs from resolver - flag if not

  SciCrunch/scibot#34 · Filter by author bandrow opened on Mar 3, 2022

• update regex to stop matching false positives

  SciCrunch/scibot#32 · Filter by author tgbugs opened on Feb 8, 2021

• dispatching on resolver response status inside submit is a major design flaw

  SciCrunch/scibot#30 · Filter by author tgbugs opened on Aug 23, 2019

• capture TextPositionSelector and/or RangeSelector

  SciCrunch/scibot#29 · Filter by author judell opened on Jun 6, 2019
  3

• review RRIDCUR:Unrecognized tags and create positive.txt negative.txt example libraries

  SciCrunch/scibot#28 · Filter by author tgbugs opened on Dec 19, 2018

• Scibot can't pull pmid/doi on bio-protocol.org

  SciCrunch/scibot#26 · Filter by author anp055 opened on Sep 14, 2018
  2

• memoizer is not thread/process aware

  SciCrunch/scibot#24 · Filter by author tgbugs opened on Aug 14, 2018
  1

• No PMID is not accurate in these cases - please fix

  SciCrunch/scibot#23 · Filter by author bandrow opened on Aug 14, 2018

• Please add a spreadsheet report for papers that contain at least 1 RRID

  SciCrunch/scibot#22 · Filter by author bandrow opened on Aug 14, 2018

• spurious no PMID, DOI

  SciCrunch/scibot#19 · Filter by author tgbugs opened on Jul 26, 2018

• silent switching when > 1 PMID or DOI per paper

  SciCrunch/scibot#18 · Filter by author tgbugs opened on Jul 25, 2018
  1

• normalize RRIDs for public release

  SciCrunch/scibot#17 · Filter by author tgbugs opened on Jul 23, 2018

• general RRID matching issue

  SciCrunch/scibot#15 · Filter by author tgbugs opened on Jun 25, 2018
  4

• update README to clarify how to use release.py

  SciCrunch/scibot#14 · Filter by author tgbugs opened on Jun 25, 2018

• public released data has an http link but should have https

  SciCrunch/scibot#13 · Filter by author bandrow opened on May 15, 2018

• Weird behavior when annotating WB strains

  SciCrunch/scibot#12 · Filter by author bandrow opened on Nov 15, 2017
  3

• public release part 1 issues

  SciCrunch/scibot#11 · Filter by author tgbugs opened on Nov 9, 2017
  2

• Many of the links in README.md are broken.

  SciCrunch/scibot#10 · Filter by author russelljjarvis opened on Sep 4, 2017
  3

• regex issues

  SciCrunch/scibot#6 · Filter by author tgbugs opened on Oct 19, 2016
  2

• dump annos.__dict__ for james

  SciCrunch/scibot#5 · Filter by author tgbugs opened on Oct 19, 2016

• Create article level annotations from NIF/SciCrunch annotation Database

  enhancement
  SciCrunch/scibot#4 · Filter by author jgrethe opened on Jul 19, 2016
  2

• export.py improvements

  SciCrunch/scibot#1 · Filter by author tgbugs opened on Feb 25, 2016