Issues

• IsolateIntergenicReads for individual samples?

  PoolLab/ReferenceEnhancer#9 · Filter by author yimwy opened on Jun 25, 2025

• Recommended package versions for ReferenceEnhancer

  PoolLab/ReferenceEnhancer#8 · Filter by author thecatsmilk opened on Jul 18, 2024

• OverlapResolutions Error with mm39 ensembl GTF

  PoolLab/ReferenceEnhancer#7 · Filter by author jkniehaus opened on Apr 3, 2024
  2

• Bam file error

  PoolLab/ReferenceEnhancer#6 · Filter by author anu-bioinfo opened on Jan 24, 2024
  2

• 5' UTR

  PoolLab/ReferenceEnhancer#5 · Filter by author krejciadam opened on Nov 29, 2023

• OverlapResolutions(genome_annotation = genome_annotation, overlap_data = gene_overlaps, gene_pattern = c("Rik$", "^Gm"))

  PoolLab/ReferenceEnhancer#4 · Filter by author trianaptx opened on Nov 27, 2023
  1

• CellRounger count error using optimized custom reference: "Transcripts with no exons were detected in the GTF"

  PoolLab/ReferenceEnhancer#3 · Filter by author schroeme opened on Oct 10, 2023

• Error when loading my gtf

  PoolLab/ReferenceEnhancer#2 · Filter by author DiegoSafian opened on Sep 15, 2023
  2