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Merged
deepakunni3 merged 1 commit into from
Aug 11, 2026
Merged

Update OBO foundry metadata #2935

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25 changes: 25 additions & 0 deletions _config.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -1007,6 +1007,31 @@ ontologies:
repository: https://github.com/CLO-Ontology/CLO
title: Cell Line Ontology
tracker: https://github.com/CLO-Ontology/CLO/issues
usages:
- description: Cellosaurus, a knowledge resource for cell lines, provides cross-references
to CLO IDs.
examples:
- description: Mouse 10B9 cell
url: https://www.cellosaurus.org/CVCL_B379
user: https://www.cellosaurus.org/
- description: NIH PubChem records include cross-references to CLO IDs.
examples:
- description: NCI-H226 (Cell)
url: https://pubchem.ncbi.nlm.nih.gov/cell/4004#section=Cell-Line-Ontology-ID
user: https://pubchem.ncbi.nlm.nih.gov
- description: NIH LINCS project uses CLO for cell line annotation.
examples:
- description: In LINCS cell line metadata, the field "CL_Alternative_ID" specifies
the CLO.
url: https://lincsproject.org/LINCS/files/Cell_Line_Metadata_2017.pdf
user: https://lincsproject.org
- description: Immune Epitope Database uses CLO for annotation
examples:
- description: In the 'USE OF ONTOLOGIES IN THE IEDB' section, "We continue to
expand our use of ontologies for more fields, and have recently incorporated
the MRO, Uberon, cell type and cell line ontologies".
url: https://pmc.ncbi.nlm.nih.gov/articles/PMC6324067/
user: https://www.iedb.org
- activity_status: active
contact:
email: lucas.leclere@obs-banyuls.fr
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44 changes: 43 additions & 1 deletion registry/ontologies.jsonld
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Original file line number Diff line number Diff line change
Expand Up @@ -1384,7 +1384,49 @@
],
"repository": "https://github.com/CLO-Ontology/CLO",
"title": "Cell Line Ontology",
"tracker": "https://github.com/CLO-Ontology/CLO/issues"
"tracker": "https://github.com/CLO-Ontology/CLO/issues",
"usages": [
{
"description": "Cellosaurus, a knowledge resource for cell lines, provides cross-references to CLO IDs.",
"examples": [
{
"description": "Mouse 10B9 cell",
"url": "https://www.cellosaurus.org/CVCL_B379"
}
],
"user": "https://www.cellosaurus.org/"
},
{
"description": "NIH PubChem records include cross-references to CLO IDs.",
"examples": [
{
"description": "NCI-H226 (Cell)",
"url": "https://pubchem.ncbi.nlm.nih.gov/cell/4004#section=Cell-Line-Ontology-ID"
}
],
"user": "https://pubchem.ncbi.nlm.nih.gov"
},
{
"description": "NIH LINCS project uses CLO for cell line annotation.",
"examples": [
{
"description": "In LINCS cell line metadata, the field \"CL_Alternative_ID\" specifies the CLO.",
"url": "https://lincsproject.org/LINCS/files/Cell_Line_Metadata_2017.pdf"
}
],
"user": "https://lincsproject.org"
},
{
"description": "Immune Epitope Database uses CLO for annotation",
"examples": [
{
"description": "In the 'USE OF ONTOLOGIES IN THE IEDB' section, \"We continue to expand our use of ontologies for more fields, and have recently incorporated the MRO, Uberon, cell type and cell line ontologies\".",
"url": "https://pmc.ncbi.nlm.nih.gov/articles/PMC6324067/"
}
],
"user": "https://www.iedb.org"
}
]
},
{
"activity_status": "active",
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