publish-tool-examples

A collection of Python Jupyter notebooks to showcase how to publish tools to the tools-registry.

Notebooks

Notebook	Description
publish-simple-tool-example.ipynb	A simple example of how to publish a tool to the tools-registry.
publish-notebook-example.ipynb	An example of how to publish a Jupyter notebook as a tool to the tools-registry.
publish-container-example.ipynb	An example of how to publish a Container/Apptainer as a tool to the tools-registry.

Getting Started

The simplest way to run the notebook is to use an online service like Google colab. You can also run the notebook locally using Jupyter Notebook or Jupyter Lab.

Using Google Colab:

1. Go to colab.research.google.com.
2. In Open notebook, select the GitHub tab.
3. Paste the Github url https://github.com/EOSC-Data-Commons/publish-tool-examples. This load the list of notebooks in the repository.
4. Click on the notebook you want to run, for example publish-simple-tool-example.ipynb.
5. Follow the instructions in the notebook to publish your tool to the tools-registry.