Scripts used for data analaysis related to the manuscript Atul Deshpande, Melanie Loth, et al., Uncovering the spatial landscape of molecular interactions within the tumor microenvironment through latent spaces. bioRxiv 2022. doi:10.1101/2022.06.02.490672
You needs to install the SpaceMarkers R package available on Github:
install.packages("remotes")
remotes::install_github("FertigLab/SpaceMarkers", dependencies = TRUE, build_vignettes = TRUE)