GitHub - Anegin24/Microbiome-analysis: Trying to modified Qiime2R pepline for my laboratory's usage

Repository navigation

Microbiome-analysis

Public

Trying to modified Qiime2R pepline for my laboratory's usage

1 star

1 watching

Name		Name	Last commit message	Last commit date
.gitignore		.gitignore
16S amplicon analysis using QIIME2 (ubuntu).docx		16S amplicon analysis using QIIME2 (ubuntu).docx
Bookfreepdf		Bookfreepdf
Download and Import SRA sequences from NCBI		Download and Import SRA sequences from NCBI
Grouped-feature-table.docx		Grouped-feature-table.docx
Import-paired-end-sequences-qiime2 (Ubuntu)		Import-paired-end-sequences-qiime2 (Ubuntu)
KSfull.rar		KSfull.rar
LDA-tutorial.Rmd		LDA-tutorial.Rmd
Microbiome biomarker (Yang Cao)		Microbiome biomarker (Yang Cao)
Qiime2-installation		Qiime2-installation
Qiime2R pepline modification		Qiime2R pepline modification
Taxa-goodbad-plot.R		Taxa-goodbad-plot.R
Testing for significance with microbiome data.R		Testing for significance with microbiome data.R
V1-V2_classifier		V1-V2_classifier
V3-V4-classifier		V3-V4-classifier
[Krona]Plot taxonomy		[Krona]Plot taxonomy
[RESCRIPT]Silvar-138-database-download-preprocessing		[RESCRIPT]Silvar-138-database-download-preprocessing
[R]mergetable.Rmd		[R]mergetable.Rmd
annotation.tsv		annotation.tsv
avatar.jpg		avatar.jpg
cytoBand.txt		cytoBand.txt
logopseq.jpg		logopseq.jpg
pcogen.jpg		pcogen.jpg
phacogen.png		phacogen.png

Trying to modified Qiime2R pepline for my laboratory's usage

1 star

1 watching