xskillscore/.github/workflows/xskillscore_testing.yml at main · xarray-contrib/xskillscore · GitHub

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name: xskillscore testing

on:
  pull_request:
  workflow_dispatch: # allows you to trigger manually

concurrency:
  group: ${{ github.workflow }}-${{ github.ref }}
  cancel-in-progress: true

permissions:
  contents: read

jobs:
  detect-ci-trigger:
    name: detect ci trigger
    runs-on: ubuntu-latest
    outputs:
      triggered: ${{ steps.detect-trigger.outputs.trigger-found }}
    steps:
      - uses: actions/checkout@v5
        with:
          fetch-depth: 2
          persist-credentials: false
      - uses: xarray-contrib/ci-trigger@v1
        id: detect-trigger
        with:
          keyword: "[skip-ci]"

  test:  # Runs testing suite on various python versions.
    name: Test xskillscore (Python ${{ matrix.python-version }})
    runs-on: ubuntu-latest
    needs: detect-ci-trigger
    if: needs.detect-ci-trigger.outputs.triggered == 'false'
    defaults:
      run:
        shell: bash -l {0}
    strategy:
      fail-fast: false
      matrix:
        python-version: [ "3.11", "3.12", "3.13", "3.14" ]
    steps:
      - uses: actions/checkout@v5
        with:
          persist-credentials: false
      - name: Set up conda (micromamba)
        uses: mamba-org/setup-micromamba@v3
        with:
          cache-downloads: true
          cache-environment: true
          environment-file: ci/minimum-tests.yml
          create-args: >
            python=${{ matrix.python-version }}
      - name: Run tests
        run: |
          pytest -n auto --cov=xskillscore --cov-report=xml --verbose
      - name: Upload coverage to codecov
        uses: codecov/codecov-action@v5
        with:
          token: ${{ secrets.CODECOV_TOKEN }}
          files: ./coverage.xml
          fail_ci_if_error: false

  doctest:  # Tests all docstrings
    name: Doctests (Python ${{ matrix.python-version }})
    runs-on: ubuntu-latest
    needs: detect-ci-trigger
    if: needs.detect-ci-trigger.outputs.triggered == 'false'
    defaults:
      run:
        shell: bash -l {0}
    strategy:
      fail-fast: false
      matrix:
        python-version: [ "3.13" ]
    steps:
      - uses: actions/checkout@v5
        with:
          persist-credentials: false
      - name: Set up conda (micromamba)
        uses: mamba-org/setup-micromamba@v3
        with:
          cache-downloads: true
          cache-environment: true
          environment-file: ci/minimum-tests.yml
          create-args: >
            python=${{ matrix.python-version }}
      - name: Install xskillscore
        run: |
          python -m pip install --no-deps -e .
      - name: Run doctests
        run: |
          python -m pytest --doctest-modules xskillscore --ignore xskillscore/tests

  docs_notebooks:  # Checks that pre-compiled notebooks in docs still work.
    name: Test notebooks in docs (Python ${{ matrix.python-version }})
    runs-on: ubuntu-latest
    needs: detect-ci-trigger
    if: needs.detect-ci-trigger.outputs.triggered == 'false'
    defaults:
      run:
        shell: bash -l {0}
    strategy:
      matrix:
        python-version: [ "3.11" ]
    steps:
      - uses: actions/checkout@v5
        with:
          persist-credentials: false
      - name: Set up conda (micromamba)
        uses: mamba-org/setup-micromamba@v3
        with:
          cache-downloads: true
          cache-environment: true
          environment-file: ci/docs_notebooks.yml
          create-args: >
            python=${{ matrix.python-version }}
      - name: Install xskillscore
        run: |
          python -m pip install --no-deps -e .
      - name: Test notebooks in docs
        run: |
          pushd docs
          nbstripout source/*.ipynb
          make -j4 html
          popd