_pkgdown.yml

url: https://poissonconsulting.github.io/extras/

template:
  package: poissontemplate

development:
  mode: auto

reference:
- title: Manipulate Objects
  desc: Functions to numericise and fill objects
  contents:
  - '`numericise`'
  - '`fill_na`'
  - '`fill_all`'
- title: Summary Functions
  desc: Functions to summarise MCMC vectors as scalars
  contents:
  - '`lower`'
  - '`upper`'
  - '`zscore`'
  - '`pvalue`'
  - '`svalue`'
  - '`direction`'
  - '`probability_direction`'
  - '`directional_information`'
  - '`xtr_mean`'
  - '`xtr_median`'
  - '`xtr_sd`'
  - '`variance`'
  - '`skewness`'
  - '`kurtosis`'
  - '`zeros`'
  - '`pzeros`'
  - '`xtr_rope`'
  - '`xtr_ci`'
  - '`xtr_ci_eti`'
  - '`xtr_ci_hdi`'
- title: Conversion Functions
  desc: Conversion functions
  contents:
  - '`fabs`'
  - '`exp2`'
  - '`exp10`'
  - '`ilog`'
  - '`ilog2`'
  - '`ilog10`'
  - '`ilogit`'
  - '`invlogit`'
  - '`inv_odds`'
  - '`log2<-`'
  - '`log10<-`'
  - '`logit`'
  - '`odds`'
  - '`phi`'
  - '`pow`'
- title: Odds Functions
  desc: Odds functions
  contents:
  - '`inv_odds`'
  - '`log_odds`'
  - '`log_odds<-`'
  - '`log_odds_ratio`'
  - '`log_odds_ratio2`'
  - '`odds`'
  - '`odds<-`'
  - '`odds_ratio`'
  - '`odds_ratio2`'
- title: Proportional Functions
  desc: Proportional functions
  contents:
  - '`proportional_change`'
  - '`proportional_change2`'
  - '`proportional_difference`'
  - '`proportional_difference2`'
- title: Translations
  desc: Translations of BUGS/JAGS functions
  contents:
  - '`fabs`'
  - '`ilog`'
  - '`ilogit`'
  - '`invlogit`'
  - '`inv_logit`'
  - '`log<-`'
  - '`logit`'
  - '`logit<-`'
  - '`phi`'
  - '`pow`'
  - '`step`'
- title: Checks and Validation
  desc: Functions to check argument values
  contents:
  - '`chk_pars`'
  - '`vld_pars`'
  - '`chk_index`'
  - '`vld_index`'
  - '`chk_indices`'
  - '`vld_indices`'
- title: Deviance
  desc: Deviances and Deviance Residuals
  contents:
  - '`dev_bern`'
  - '`dev_beta_binom`'
  - '`dev_binom`'
  - '`dev_gamma`'
  - '`dev_gamma_pois`'
  - '`dev_gamma_pois_zi`'
  - '`dev_lnorm`'
  - '`dev_multinom`'
  - '`dev_neg_binom`'
  - '`dev_norm`'
  - '`dev_pois`'
  - '`dev_pois_zi`'
  - '`dev_skewnorm`'
  - '`dev_skewlnorm`'
  - '`dev_student`'
- title: Residual
  desc: Raw and Deviance Residuals
  contents:
  - '`res_bern`'
  - '`res_beta_binom`'
  - '`res_binom`'
  - '`res_gamma`'
  - '`res_gamma_pois`'
  - '`res_gamma_pois_zi`'
  - '`res_lnorm`'
  - '`res_multinom`'
  - '`res_neg_binom`'
  - '`res_norm`'
  - '`res_pois`'
  - '`res_pois_zi`'
  - '`res_skewnorm`'
  - '`res_skewlnorm`'
  - '`res_student`'
- title: Log-Likelihood
  desc: Log-likelihood functions
  contents:
  - '`log_lik_bern`'
  - '`log_lik_beta`'
  - '`log_lik_beta_binom`'
  - '`log_lik_binom`'
  - '`log_lik_gamma`'
  - '`log_lik_gamma_pois`'
  - '`log_lik_gamma_pois_zi`'
  - '`log_lik_exp`'
  - '`log_lik_lnorm`'
  - '`log_lik_multinom`'
  - '`log_lik_neg_binom`'
  - '`log_lik_norm`'
  - '`log_lik_pois`'
  - '`log_lik_pois_zi`'
  - '`log_lik_skewnorm`'
  - '`log_lik_skewlnorm`'
  - '`log_lik_student`'
  - '`log_lik_unif`'
- title: Cumulative Distribution
  desc: Cumulative distribution functions
  contents:
  - '`prob_bern`'
  - '`prob_beta`'
  - '`prob_beta_binom`'
  - '`prob_binom`'
  - '`prob_exp`'
  - '`prob_gamma`'
  - '`prob_gamma_pois`'
  - '`prob_gamma_pois_zi`'
  - '`prob_lnorm`'
  - '`prob_neg_binom`'
  - '`prob_norm`'
  - '`prob_pois`'
  - '`prob_pois_zi`'
  - '`prob_skewnorm`'
  - '`prob_skewlnorm`'
  - '`prob_student`'
  - '`prob_unif`'
- title: Quantile
  desc: Quantile functions
  contents:
  - '`quant_bern`'
  - '`quant_beta`'
  - '`quant_binom`'
  - '`quant_exp`'
  - '`quant_gamma`'
  - '`quant_gamma_pois`'
  - '`quant_gamma_pois_zi`'
  - '`quant_lnorm`'
  - '`quant_neg_binom`'
  - '`quant_norm`'
  - '`quant_pois`'
  - '`quant_pois_zi`'
  - '`quant_skewnorm`'
  - '`quant_skewlnorm`'
  - '`quant_student`'
  - '`quant_unif`'
- title: Random
  desc: Random sample functions
  contents:
  - '`ran_bern`'
  - '`ran_beta_binom`'
  - '`ran_binom`'
  - '`ran_gamma`'
  - '`ran_gamma_pois`'
  - '`ran_gamma_pois_zi`'
  - '`ran_lnorm`'
  - '`ran_multinom`'
  - '`ran_neg_binom`'
  - '`ran_norm`'
  - '`ran_pois`'
  - '`ran_pois_zi`'
  - '`ran_skewnorm`'
  - '`ran_skewlnorm`'
  - '`ran_student`'
- title: Sensitivity
  desc: Sensitivity functions
  contents:
  - '`sens_beta`'
  - '`sens_exp`'
  - '`sens_gamma`'
  - '`sens_gamma_pois`'
  - '`sens_gamma_pois_zi`'
  - '`sens_lnorm`'
  - '`sens_neg_binom`'
  - '`sens_norm`'
  - '`sens_pois`'
  - '`sens_skewnorm`'
  - '`sens_skewlnorm`'
  - '`sens_student`'
- title: Bernoulli
  desc: Bernoulli distribution functions
  contents:
  - '`dbern`'
  - '`pbern`'
  - '`qbern`'
  - '`rbern`'
- title: Skew Normal
  desc: Skew Normal distribution functions
  contents:
  - '`dskewnorm`'
  - '`pskewnorm`'
  - '`qskewnorm`'
  - '`rskewnorm`'
- title: Skew-Lognormal
  desc: Skew-Lognormal distribution functions
  contents:
  - '`dskewlnorm`'
  - '`pskewlnorm`'
  - '`qskewlnorm`'
  - '`rskewlnorm`'
- title: Miscellaneous
  desc: Miscellaneous functions
  contents: '`par_pattern`'
- title: Generics
  desc: Generic Functions
  contents: '`as_list`'
- title: Deprecated
  desc: Deprecated functions
  contents:
  - '`pextreme`'
  - '`sextreme`'
  - '`as_list_unnamed`'