From 412f99393da1a5eac3ee2024b67f2096449e5921 Mon Sep 17 00:00:00 2001 From: Marta Huertas Date: Mon, 20 Apr 2026 10:31:53 +0200 Subject: [PATCH 1/2] fix: update path and name --- docs/Cluster_basics/s3.md | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) diff --git a/docs/Cluster_basics/s3.md b/docs/Cluster_basics/s3.md index 63db182a..a1aefb68 100644 --- a/docs/Cluster_basics/s3.md +++ b/docs/Cluster_basics/s3.md @@ -77,10 +77,10 @@ $ conda activate s3-minio # Generate credentials # -r -> creates the ~/.config/rclone/rclone.conf file # -d -> duration in days for credentials validity -$ python3 /apps/scripts/irb-storage-public-scripts/minio/minio-sts-credentials-request.py -u mgrau -r -d 365 +$ python3 /apps/scripts/irb-storage-public-scripts/minio-sts-credentials-request.py -u mgrau -r -d 365 # test -$ rclone lsf irb-minio://bbg +$ rclone lsf irbminio://bbg ``` This script (*minio-sts-credentials-request.py*) generates the config file used by rclone: @@ -88,7 +88,7 @@ This script (*minio-sts-credentials-request.py*) generates the config file used ```bash $ cat ~/.config/rclone/rclone.conf -[irb-minio] +[irbminio] type = s3 provider = Minio endpoint = http://irbminio.irbbarcelona.pcb.ub.es:9000 @@ -121,13 +121,13 @@ As mentioned earlier, you can mount an S3 bucket as a POSIX-like partition (simi ```bash $ ls /home/mgrau/s3/bbg-scratch/ # Mount -$ rclone mount irb-minio:bbg-scratch /home/mgrau/s3/bbg-scratch --vfs-cache-mode off --read-only & +$ rclone mount irbminio:bbg-scratch /home/mgrau/s3/bbg-scratch --vfs-cache-mode off --read-only & [1] 636085 $ ls /home/mgrau/s3/bbg-scratch/ work # Unmount $ fusermount -u /home/mgrau/s3/bbg-scratch -[1]+ Done rclone mount irb-minio:bbg-scratch /home/mgrau/s3/bbg-scratch +[1]+ Done rclone mount irbminio:bbg-scratch /home/mgrau/s3/bbg-scratch --vfs-cache-mode off --read-only $ ls /home/mgrau/s3/bbg-scratch/ $ From d75fe13f491d33354a5daba086a03f169be7a8d3 Mon Sep 17 00:00:00 2001 From: Marta Huertas Date: Mon, 20 Apr 2026 10:39:35 +0200 Subject: [PATCH 2/2] refactor: homogenize s3 access --- docs/Cluster_basics/s3.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docs/Cluster_basics/s3.md b/docs/Cluster_basics/s3.md index a1aefb68..9bae921d 100644 --- a/docs/Cluster_basics/s3.md +++ b/docs/Cluster_basics/s3.md @@ -80,7 +80,7 @@ $ conda activate s3-minio $ python3 /apps/scripts/irb-storage-public-scripts/minio-sts-credentials-request.py -u mgrau -r -d 365 # test -$ rclone lsf irbminio://bbg +$ rclone lsf irbminio:bbg ``` This script (*minio-sts-credentials-request.py*) generates the config file used by rclone: