pyproject.toml

[project]
name = "weiping-lab"
version = "1.6.0"
description = "Autonomous research lab: phenomenon-driven discovery, cross-domain transfer, kill-first ideation, evidence-gated pipeline"
requires-python = ">=3.11"
dependencies = [
    "anthropic>=0.40.0",
    "openai>=1.50.0",
    "httpx>=0.27.0",
    "pydantic>=2.9.0",
    "python-dotenv>=1.0.0",
    "rich>=13.9.0",
    "typer>=0.12.0",
    "arxiv>=2.1.0",
    "semanticscholar>=0.8.0",
    "aiofiles>=24.1.0",
    "jinja2>=3.1.0",
    "pyyaml>=6.0.0",
    "numpy>=1.26.0",
    "scipy>=1.13.0",
    "fastapi>=0.115.0",
    "uvicorn>=0.30.0",
    "sse-starlette>=2.1.0",
]

[project.optional-dependencies]
dev = [
    "pytest>=8.0",
    "ruff>=0.6",
    "mypy>=1.11",
    "pytest-asyncio>=0.23",
    "httpx2>=2.12,<3",
    "pip-audit>=2.10.1",
]
viz = ["matplotlib>=3.8", "seaborn>=0.13", "plotly>=5.18"]
latex = ["pylatexenc>=2.10"]

[project.scripts]
vlab = "cli.main:main"
vlab-api = "api.server:app"

[tool.setuptools.packages.find]
where = ["."]
include = ["cli*", "lab*", "api*"]

[build-system]
requires = ["setuptools>=75.0"]
build-backend = "setuptools.build_meta"

[tool.ruff]
line-length = 100

[tool.ruff.lint]
# Ruff 0.16 expanded its implicit defaults from the historical E4/E7/E9/F
# baseline. Keep the established project policy explicit across fresh installs.
select = ["E4", "E7", "E9", "F"]

[tool.pytest.ini_options]
testpaths = ["tests"]