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from __future__ import annotations
from functools import lru_cache
import typing as t
import logging
from sqlglot import exp
from sqlmesh.core.dialect import to_schema
from sqlmesh.utils.aws import validate_s3_uri, parse_s3_uri
from sqlmesh.core.engine_adapter.mixins import PandasNativeFetchDFSupportMixin, RowDiffMixin
from sqlmesh.core.engine_adapter.trino import TrinoEngineAdapter
from sqlmesh.core.node import IntervalUnit
import posixpath
from sqlmesh.utils.errors import SQLMeshError
from sqlmesh.core.engine_adapter.shared import (
CatalogSupport,
DataObject,
DataObjectType,
CommentCreationTable,
CommentCreationView,
SourceQuery,
InsertOverwriteStrategy,
)
if t.TYPE_CHECKING:
from sqlmesh.core._typing import SchemaName, TableName
from sqlmesh.core.engine_adapter._typing import QueryOrDF
TableType = t.Union[t.Literal["hive"], t.Literal["iceberg"]]
logger = logging.getLogger(__name__)
class AthenaEngineAdapter(PandasNativeFetchDFSupportMixin, RowDiffMixin):
DIALECT = "athena"
SUPPORTS_TRANSACTIONS = False
SUPPORTS_REPLACE_TABLE = False
# Athena's support for table and column comments is too patchy to consider "supported"
# Hive tables: Table + Column comments are supported
# Iceberg tables: Column comments only
# CTAS, Views: No comment support at all
COMMENT_CREATION_TABLE = CommentCreationTable.UNSUPPORTED
COMMENT_CREATION_VIEW = CommentCreationView.UNSUPPORTED
SCHEMA_DIFFER_KWARGS = TrinoEngineAdapter.SCHEMA_DIFFER_KWARGS
MAX_TIMESTAMP_PRECISION = 3 # copied from Trino
# Athena does not deal with comments well, e.g:
# >>> self._execute('/* test */ DESCRIBE foo')
# pyathena.error.OperationalError: FAILED: ParseException line 1:0 cannot recognize input near '/' '*' 'test'
ATTACH_CORRELATION_ID = False
SUPPORTS_QUERY_EXECUTION_TRACKING = True
SUPPORTED_DROP_CASCADE_OBJECT_KINDS = ["DATABASE", "SCHEMA"]
def __init__(
self, *args: t.Any, s3_warehouse_location: t.Optional[str] = None, **kwargs: t.Any
):
# Need to pass s3_warehouse_location to the superclass so that it goes into _extra_config
# which means that EngineAdapter.with_settings() keeps this property when it makes a clone
super().__init__(*args, s3_warehouse_location=s3_warehouse_location, **kwargs)
self.s3_warehouse_location = s3_warehouse_location
self._default_catalog = self._default_catalog or "awsdatacatalog"
@property
def s3_warehouse_location(self) -> t.Optional[str]:
return self._s3_warehouse_location
@s3_warehouse_location.setter
def s3_warehouse_location(self, value: t.Optional[str]) -> None:
if value:
value = validate_s3_uri(value, base=True)
self._s3_warehouse_location = value
@property
def s3_warehouse_location_or_raise(self) -> str:
# this makes tests easier to write without extra null checks to keep mypy happy
if location := self.s3_warehouse_location:
return location
raise SQLMeshError("s3_warehouse_location was expected to be populated; it isnt")
@property
def catalog_support(self) -> CatalogSupport:
# Athena has the concept of catalogs but the current catalog is set in the connection parameters with no way to query or change it after that
# It also cant create new catalogs, you have to configure them in AWS. Typically, catalogs that are not "awsdatacatalog"
# are pointers to the "awsdatacatalog" of other AWS accounts
return CatalogSupport.SINGLE_CATALOG_ONLY
def create_state_table(
self,
table_name: str,
target_columns_to_types: t.Dict[str, exp.DataType],
primary_key: t.Optional[t.Tuple[str, ...]] = None,
) -> None:
self.create_table(
table_name,
target_columns_to_types,
primary_key=primary_key,
# it's painfully slow, but it works
table_format="iceberg",
)
def _get_data_objects(
self, schema_name: SchemaName, object_names: t.Optional[t.Set[str]] = None
) -> t.List[DataObject]:
"""
Returns all the data objects that exist in the given schema and optionally catalog.
"""
schema_name = to_schema(schema_name)
schema = schema_name.db
query = (
exp.select(
exp.column("table_catalog").as_("catalog"),
exp.column("table_schema", table="t").as_("schema"),
exp.column("table_name", table="t").as_("name"),
exp.case()
.when(
exp.column("table_type", table="t").eq("BASE TABLE"),
exp.Literal.string("table"),
)
.else_(exp.column("table_type", table="t"))
.as_("type"),
)
.from_(exp.to_table("information_schema.tables", alias="t"))
.where(exp.column("table_schema", table="t").eq(schema))
)
if object_names:
query = query.where(exp.column("table_name", table="t").isin(*object_names))
df = self.fetchdf(query)
return [
DataObject(
catalog=row.catalog, # type: ignore
schema=row.schema, # type: ignore
name=row.name, # type: ignore
type=DataObjectType.from_str(row.type), # type: ignore
)
for row in df.itertuples()
]
def columns(
self, table_name: TableName, include_pseudo_columns: bool = False
) -> t.Dict[str, exp.DataType]:
table = exp.to_table(table_name)
# note: the data_type column contains the full parameterized type, eg 'varchar(10)'
query = (
exp.select("column_name", "data_type")
.from_("information_schema.columns")
.where(exp.column("table_schema").eq(table.db), exp.column("table_name").eq(table.name))
.order_by("ordinal_position")
)
result = self.fetchdf(query, quote_identifiers=True)
return {
str(r.column_name): exp.DataType.build(str(r.data_type))
for r in result.itertuples(index=False)
}
def _create_schema(
self,
schema_name: SchemaName,
ignore_if_exists: bool,
warn_on_error: bool,
properties: t.List[exp.Expression],
kind: str,
) -> None:
if location := self._table_location(table_properties=None, table=exp.to_table(schema_name)):
# don't add extra LocationProperty's if one already exists
if not any(p for p in properties if isinstance(p, exp.LocationProperty)):
properties.append(location)
return super()._create_schema(
schema_name=schema_name,
ignore_if_exists=ignore_if_exists,
warn_on_error=warn_on_error,
properties=properties,
kind=kind,
)
def _build_create_table_exp(
self,
table_name_or_schema: t.Union[exp.Schema, TableName],
expression: t.Optional[exp.Expression],
exists: bool = True,
replace: bool = False,
target_columns_to_types: t.Optional[t.Dict[str, exp.DataType]] = None,
table_description: t.Optional[str] = None,
table_kind: t.Optional[str] = None,
partitioned_by: t.Optional[t.List[exp.Expression]] = None,
table_properties: t.Optional[t.Dict[str, exp.Expression]] = None,
**kwargs: t.Any,
) -> exp.Create:
exists = False if replace else exists
table: exp.Table
if isinstance(table_name_or_schema, str):
table = exp.to_table(table_name_or_schema)
elif isinstance(table_name_or_schema, exp.Schema):
table = table_name_or_schema.this
else:
table = table_name_or_schema
properties = self._build_table_properties_exp(
table=table,
expression=expression,
target_columns_to_types=target_columns_to_types,
partitioned_by=partitioned_by,
table_properties=table_properties,
table_description=table_description,
table_kind=table_kind,
**kwargs,
)
is_hive = self._table_type(kwargs.get("table_format", None)) == "hive"
# Filter any PARTITIONED BY properties from the main column list since they cant be specified in both places
# ref: https://docs.aws.amazon.com/athena/latest/ug/partitions.html
if is_hive and partitioned_by and isinstance(table_name_or_schema, exp.Schema):
partitioned_by_column_names = {e.name for e in partitioned_by}
filtered_expressions = [
e
for e in table_name_or_schema.expressions
if isinstance(e, exp.ColumnDef) and e.this.name not in partitioned_by_column_names
]
table_name_or_schema.args["expressions"] = filtered_expressions
return exp.Create(
this=table_name_or_schema,
kind=table_kind or "TABLE",
replace=replace,
exists=exists,
expression=expression,
properties=properties,
)
def _build_table_properties_exp(
self,
catalog_name: t.Optional[str] = None,
table_format: t.Optional[str] = None,
storage_format: t.Optional[str] = None,
partitioned_by: t.Optional[t.List[exp.Expression]] = None,
partition_interval_unit: t.Optional[IntervalUnit] = None,
clustered_by: t.Optional[t.List[exp.Expression]] = None,
table_properties: t.Optional[t.Dict[str, exp.Expression]] = None,
target_columns_to_types: t.Optional[t.Dict[str, exp.DataType]] = None,
table_description: t.Optional[str] = None,
table_kind: t.Optional[str] = None,
table: t.Optional[exp.Table] = None,
expression: t.Optional[exp.Expression] = None,
**kwargs: t.Any,
) -> t.Optional[exp.Properties]:
properties: t.List[exp.Expression] = []
table_properties = table_properties or {}
is_hive = self._table_type(table_format) == "hive"
is_iceberg = not is_hive
if is_hive and not expression:
# Hive tables are CREATE EXTERNAL TABLE, Iceberg tables are CREATE TABLE
# Unless it's a CTAS, those are always CREATE TABLE
properties.append(exp.ExternalProperty())
if table_format:
properties.append(
exp.Property(this=exp.var("table_type"), value=exp.Literal.string(table_format))
)
if table_description:
properties.append(exp.SchemaCommentProperty(this=exp.Literal.string(table_description)))
if partitioned_by:
schema_expressions: t.List[exp.Expression] = []
if is_hive and target_columns_to_types:
# For Hive-style tables, you cannot include the partitioned by columns in the main set of columns
# In the PARTITIONED BY expression, you also cant just include the column names, you need to include the data type as well
# ref: https://docs.aws.amazon.com/athena/latest/ug/partitions.html
for match_name, match_dtype in self._find_matching_columns(
partitioned_by, target_columns_to_types
):
column_def = exp.ColumnDef(this=exp.to_identifier(match_name), kind=match_dtype)
schema_expressions.append(column_def)
else:
schema_expressions = partitioned_by
properties.append(
exp.PartitionedByProperty(this=exp.Schema(expressions=schema_expressions))
)
if clustered_by:
# Athena itself supports CLUSTERED BY, via the syntax CLUSTERED BY (col) INTO <n> BUCKETS
# However, SQLMesh is more closely aligned with BigQuery's notion of clustering and
# defines `clustered_by` as a List[str] with no way of indicating the number of buckets
#
# Athena's concept of CLUSTER BY is more like Iceberg's `bucket(<num_buckets>, col)` partition transform
logging.warning("clustered_by is not supported in the Athena adapter at this time")
if storage_format:
if is_iceberg:
# TBLPROPERTIES('format'='parquet')
table_properties["format"] = exp.Literal.string(storage_format)
else:
# STORED AS PARQUET
properties.append(exp.FileFormatProperty(this=storage_format))
if table and (location := self._table_location_or_raise(table_properties, table)):
properties.append(location)
if is_iceberg and expression:
# To make a CTAS expression persist as iceberg, alongside setting `table_type=iceberg`, you also need to set is_external=false
# Note that SQLGlot does the right thing with LocationProperty and writes it as `location` (Iceberg) instead of `external_location` (Hive)
# ref: https://docs.aws.amazon.com/athena/latest/ug/create-table-as.html#ctas-table-properties
properties.append(exp.Property(this=exp.var("is_external"), value="false"))
for name, value in table_properties.items():
properties.append(exp.Property(this=exp.var(name), value=value))
if properties:
return exp.Properties(expressions=properties)
return None
def drop_table(self, table_name: TableName, exists: bool = True, **kwargs: t.Any) -> None:
table = exp.to_table(table_name)
if self._query_table_type(table) == "hive":
self._truncate_table(table)
return super().drop_table(table_name=table, exists=exists, **kwargs)
def _truncate_table(self, table_name: TableName) -> None:
table = exp.to_table(table_name)
# Truncating an Iceberg table is just DELETE FROM <table>
if self._query_table_type(table) == "iceberg":
return self.delete_from(table, exp.true())
# Truncating a partitioned Hive table is dropping all partitions and deleting the data from S3
if self._is_hive_partitioned_table(table):
self._clear_partition_data(table, exp.true())
elif s3_location := self._query_table_s3_location(table):
# Truncating a non-partitioned Hive table is clearing out all data in its Location
self._clear_s3_location(s3_location)
def _table_type(self, table_format: t.Optional[str] = None) -> TableType:
"""
Interpret the "table_format" property to check if this is a Hive or an Iceberg table
"""
if table_format and table_format.lower() == "iceberg":
return "iceberg"
# if we cant detect any indication of Iceberg, this is a Hive table
return "hive"
def _query_table_type(self, table: exp.Table) -> t.Optional[TableType]:
if self.table_exists(table):
return self._query_table_type_or_raise(table)
return None
@lru_cache()
def _query_table_type_or_raise(self, table: exp.Table) -> TableType:
"""
Hit the DB to check if this is a Hive or an Iceberg table.
Note that in order to @lru_cache() this method, we have the following assumptions:
- The table must exist (otherwise we would cache None if this method was called before table creation and always return None after creation)
- The table type will not change within the same SQLMesh session
"""
# Note: SHOW TBLPROPERTIES gets parsed by SQLGlot as an exp.Command anyway so we just use a string here
# This also means we need to use dialect="hive" instead of dialect="athena" so that the identifiers get the correct quoting (backticks)
for row in self.fetchall(f"SHOW TBLPROPERTIES {table.sql(dialect='hive', identify=True)}"):
# This query returns a single column with values like 'EXTERNAL\tTRUE'
row_lower = row[0].lower()
if "external" in row_lower and "true" in row_lower:
return "hive"
return "iceberg"
def _is_hive_partitioned_table(self, table: exp.Table) -> bool:
try:
self._list_partitions(table=table, where=None, limit=1)
return True
except Exception as e:
if "TABLE_NOT_FOUND" in str(e):
return False
raise e
def _table_location_or_raise(
self, table_properties: t.Optional[t.Dict[str, exp.Expression]], table: exp.Table
) -> exp.LocationProperty:
location = self._table_location(table_properties, table)
if not location:
raise SQLMeshError(
f"Cannot figure out location for table {table}. Please either set `s3_base_location` in `physical_properties` or set `s3_warehouse_location` in the Athena connection config"
)
return location
def _table_location(
self,
table_properties: t.Optional[t.Dict[str, exp.Expression]],
table: exp.Table,
) -> t.Optional[exp.LocationProperty]:
base_uri: str
# If the user has manually specified a `s3_base_location`, use it
if table_properties and "s3_base_location" in table_properties:
s3_base_location_property = table_properties.pop(
"s3_base_location"
) # pop because it's handled differently and we dont want it to end up in the TBLPROPERTIES clause
if isinstance(s3_base_location_property, exp.Expression):
base_uri = s3_base_location_property.name
else:
base_uri = s3_base_location_property
elif self.s3_warehouse_location:
# If the user has set `s3_warehouse_location` in the connection config, the base URI is <s3_warehouse_location>/<catalog>/<schema>/
base_uri = posixpath.join(
self.s3_warehouse_location, table.catalog or "", table.db or ""
)
else:
return None
full_uri = validate_s3_uri(posixpath.join(base_uri, table.text("this") or ""), base=True)
return exp.LocationProperty(this=exp.Literal.string(full_uri))
def _find_matching_columns(
self, partitioned_by: t.List[exp.Expression], columns_to_types: t.Dict[str, exp.DataType]
) -> t.List[t.Tuple[str, exp.DataType]]:
matches = []
for col in partitioned_by:
# TODO: do we care about normalization?
key = col.name
if isinstance(col, exp.Column) and (match_dtype := columns_to_types.get(key)):
matches.append((key, match_dtype))
return matches
def replace_query(
self,
table_name: TableName,
query_or_df: QueryOrDF,
target_columns_to_types: t.Optional[t.Dict[str, exp.DataType]] = None,
table_description: t.Optional[str] = None,
column_descriptions: t.Optional[t.Dict[str, str]] = None,
source_columns: t.Optional[t.List[str]] = None,
supports_replace_table_override: t.Optional[bool] = None,
**kwargs: t.Any,
) -> None:
table = exp.to_table(table_name)
if self._query_table_type(table=table) == "hive":
self.drop_table(table)
return super().replace_query(
table_name=table,
query_or_df=query_or_df,
target_columns_to_types=target_columns_to_types,
table_description=table_description,
column_descriptions=column_descriptions,
source_columns=source_columns,
**kwargs,
)
def _insert_overwrite_by_time_partition(
self,
table_name: TableName,
source_queries: t.List[SourceQuery],
target_columns_to_types: t.Dict[str, exp.DataType],
where: exp.Condition,
**kwargs: t.Any,
) -> None:
table = exp.to_table(table_name)
table_type = self._query_table_type(table)
if table_type == "iceberg":
# Iceberg tables work as expected, we can use the default behaviour
return super()._insert_overwrite_by_time_partition(
table, source_queries, target_columns_to_types, where, **kwargs
)
# For Hive tables, we need to drop all the partitions covered by the query and delete the data from S3
self._clear_partition_data(table, where)
# Now the data is physically gone, we can continue with inserting a new partition
return super()._insert_overwrite_by_time_partition(
table,
source_queries,
target_columns_to_types,
where,
insert_overwrite_strategy_override=InsertOverwriteStrategy.INTO_IS_OVERWRITE, # since we already cleared the data
**kwargs,
)
def _clear_partition_data(self, table: exp.Table, where: t.Optional[exp.Condition]) -> None:
if partitions_to_drop := self._list_partitions(table, where):
for _, s3_location in partitions_to_drop:
logger.debug(
f"Clearing S3 location for '{table.sql(dialect=self.dialect)}': {s3_location}"
)
self._clear_s3_location(s3_location)
partition_values = [k for k, _ in partitions_to_drop]
logger.debug(
f"Dropping partitions for '{table.sql(dialect=self.dialect)}' from metastore: {partition_values}"
)
self._drop_partitions_from_metastore(table, partition_values)
def _list_partitions(
self,
table: exp.Table,
where: t.Optional[exp.Condition] = None,
limit: t.Optional[int] = None,
) -> t.List[t.Tuple[t.List[str], str]]:
# Use Athena's magic "$partitions" metadata table to identify the partitions to drop
# Doing it this way allows us to use SQL to filter the partition list
partition_table_name = table.copy()
partition_table_name.this.replace(
exp.to_identifier(f"{table.name}$partitions", quoted=True)
)
query = exp.select("*").from_(partition_table_name).where(where)
if limit:
query = query.limit(limit)
partition_values = [list(r) for r in self.fetchall(query, quote_identifiers=True)]
if partition_values:
response = self._glue_client.batch_get_partition(
DatabaseName=table.db,
TableName=table.name,
PartitionsToGet=[{"Values": [str(v) for v in lst]} for lst in partition_values],
)
return sorted(
[(p["Values"], p["StorageDescriptor"]["Location"]) for p in response["Partitions"]]
)
return []
def _query_table_s3_location(self, table: exp.Table) -> str:
response = self._glue_client.get_table(DatabaseName=table.db, Name=table.name)
# Athena wont let you create a table without a location, so *theoretically* this should never be empty
if location := response.get("Table", {}).get("StorageDescriptor", {}).get("Location", None):
return location
raise SQLMeshError(f"Table {table} has no location set in the metastore!")
def _drop_partitions_from_metastore(
self, table: exp.Table, partition_values: t.List[t.List[str]]
) -> None:
# todo: switch to itertools.batched when our minimum supported Python is 3.12
# 25 = maximum number of partitions that batch_delete_partition can process at once
# ref: https://docs.aws.amazon.com/glue/latest/webapi/API_BatchDeletePartition.html#API_BatchDeletePartition_RequestParameters
def _chunks() -> t.Iterable[t.List[t.List[str]]]:
for i in range(0, len(partition_values), 25):
yield partition_values[i : i + 25]
for batch in _chunks():
self._glue_client.batch_delete_partition(
DatabaseName=table.db,
TableName=table.name,
PartitionsToDelete=[{"Values": v} for v in batch],
)
def delete_from(self, table_name: TableName, where: t.Union[str, exp.Expression]) -> None:
table = exp.to_table(table_name)
table_type = self._query_table_type(table)
# If Iceberg, DELETE operations work as expected
if table_type == "iceberg":
return super().delete_from(table, where)
# If Hive, DELETE is an error
if table_type == "hive":
# However, if there are no actual records to delete, we can make DELETE a no-op
# This simplifies a bunch of calling code that just assumes DELETE works (which to be fair is a reasonable assumption since it does for every other engine)
empty_check = (
exp.select("*").from_(table).where(where).limit(1)
) # deliberately not count(*) because we want the engine to stop as soon as it finds a record
if len(self.fetchall(empty_check)) > 0:
raise SQLMeshError("Cannot delete individual records from a Hive table")
return None
def _clear_s3_location(self, s3_uri: str) -> None:
s3 = self._s3_client
bucket, key = parse_s3_uri(s3_uri)
if not key.endswith("/"):
key = f"{key}/"
keys_to_delete = []
# note: uses Delimiter=/ to prevent stepping into folders
# the assumption is that all the files in a partition live directly at the partition `Location`
for page in s3.get_paginator("list_objects_v2").paginate(
Bucket=bucket, Prefix=key, Delimiter="/"
):
# list_objects_v2() returns 1000 keys per page so that lines up nicely with delete_objects() being able to delete 1000 keys at a time
keys = [item["Key"] for item in page.get("Contents", [])]
if keys:
keys_to_delete.append(keys)
for chunk in keys_to_delete:
s3.delete_objects(Bucket=bucket, Delete={"Objects": [{"Key": k} for k in chunk]})
@property
def _glue_client(self) -> t.Any:
return self._boto3_client("glue")
@property
def _s3_client(self) -> t.Any:
return self._boto3_client("s3")
def _boto3_client(self, name: str) -> t.Any:
# use the client factory from PyAthena which is already configured with the correct AWS details
conn = self.connection
return conn.session.client(
name,
region_name=conn.region_name,
config=conn.config,
**conn._client_kwargs,
) # type: ignore
def get_current_catalog(self) -> t.Optional[str]:
return self.connection.catalog_name