Add R-CMD-check workflow configuration

Author: LCrossman

.github/workflows/R-CMD-check.yaml

@@ -0,0 +1,58 @@
+on:
+  push:
+    branches: [main, master]
+  pull_request:
+    branches: [main, master]
+
+name: R-CMD-check
+
+jobs:
+  R-CMD-check:
+    runs-on: ${{ matrix.config.os }}
+    name: ${{ matrix.config.os }} (${{ matrix.config.r }})
+
+    strategy:
+      fail-fast: false
+      matrix:
+        config:
+          - {os: macos-latest, r: 'release'}
+          - {os: ubuntu-latest, r: 'release'}
+
+    env:
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+      R_KEEP_PKG_SOURCE: yes
+
+    steps:
+      - name: Checkout Repository
+        uses: actions/checkout@v4
+
+      - name: Set up Rust
+        uses: dtolnay/rust-toolchain@stable
+
+      - name: Cache Rust Compilation
+        uses: Swatinem/rust-cache@v2
+        with:
+          # Update this path to point inside the subdirectory!
+          workspaces: "microbiorust-r/src/rust -> target"
+
+      - name: Set up R
+        uses: r-lib/actions/setup-r@v2
+        with:
+          r-version: ${{ matrix.config.r }}
+          use-public-rspm: true
+
+      - name: Install R Dependencies
+        uses: r-lib/actions/setup-r-dependencies@v2
+        with:
+          # Tell R where the DESCRIPTION file is
+          working-directory: microbiorust-r
+          extra-packages: any::rcmdcheck
+          needs: check
+
+      - name: Run R CMD Check
+        uses: r-lib/actions/check-r-package@v2
+        with:
+          # Tell the checker where the package is
+          working-directory: microbiorust-r
+        env:
+          _R_CHECK_CRAN_INCOMING_: false