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internal_use/docs/_build/gettext/AdvancedSegmentation.pot

Lines changed: 16 additions & 16 deletions
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@@ -8,7 +8,7 @@ msgid ""
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msgstr ""
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"Project-Id-Version: cellprofiler-tutorials \n"
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"Report-Msgid-Bugs-To: \n"
11-
"POT-Creation-Date: 2024-03-15 11:33-0400\n"
11+
"POT-Creation-Date: 2026-02-25 20:59+0000\n"
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"PO-Revision-Date: YEAR-MO-DA HO:MI+ZONE\n"
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"Last-Translator: FULL NAME <EMAIL@ADDRESS>\n"
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"Language-Team: LANGUAGE <LL@li.org>\n"
@@ -81,7 +81,7 @@ msgid "**Input images and configure metadata**"
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msgstr ""
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#: ../../source/AdvancedSegmentation/BBBC022_AnalysisExercise.md:77
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msgid "1. **Load images and metadata**"
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msgid "**1. Load images and metadata**"
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msgstr ""
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#: ../../source/AdvancedSegmentation/BBBC022_AnalysisExercise.md:79
@@ -101,7 +101,7 @@ msgid "Drag and drop the ‘BBBC022_20585_AE’ folder into the ‘File list’
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msgstr ""
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#: ../../source/AdvancedSegmentation/BBBC022_AnalysisExercise.md:89
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msgid "2. **Import metadata from the CSV**"
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msgid "**2. Import metadata from the CSV**"
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msgstr ""
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#: ../../source/AdvancedSegmentation/BBBC022_AnalysisExercise.md:91
@@ -153,7 +153,7 @@ msgid "Image_Metadata_CPD_WELL_POSITION (from the spreadsheet) is matched to Wel
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msgstr ""
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#: ../../source/AdvancedSegmentation/BBBC022_AnalysisExercise.md:116
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msgid "3. **Examine the channel mappings in NamesAndTypes (optional)**"
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msgid "**3. Examine the channel mappings in NamesAndTypes (optional)**"
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msgstr ""
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#: ../../source/AdvancedSegmentation/BBBC022_AnalysisExercise.md:118
@@ -205,7 +205,7 @@ msgid "**Illumination correction**"
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msgstr ""
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#: ../../source/AdvancedSegmentation/BBBC022_AnalysisExercise.md:157
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msgid "4. **Examine the output of the CorrectIlluminationApply module (optional)**"
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msgid "**4. Examine the output of the CorrectIlluminationApply module (optional)**"
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msgstr ""
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#: ../../source/AdvancedSegmentation/BBBC022_AnalysisExercise.md:159
@@ -233,11 +233,11 @@ msgid "*Figure 4: Application of the illumination correction functions.*"
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msgstr ""
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#: ../../source/AdvancedSegmentation/BBBC022_AnalysisExercise.md:186
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msgid "**Segmenet Nuclei, Cells and Cytoplasm**"
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msgid "**Segment Nuclei, Cells and Cytoplasm**"
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msgstr ""
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#: ../../source/AdvancedSegmentation/BBBC022_AnalysisExercise.md:188
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msgid "5. **IdentifyPrimaryObjects- Nuclei**"
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msgid "**5. IdentifyPrimaryObjects- Nuclei**"
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msgstr ""
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#: ../../source/AdvancedSegmentation/BBBC022_AnalysisExercise.md:190
@@ -261,7 +261,7 @@ msgid "Adjust the segmentation parameters until you feel you’re ready to move
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msgstr ""
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#: ../../source/AdvancedSegmentation/BBBC022_AnalysisExercise.md:205
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msgid "6. **IdentifySecondaryObjects- Cells**"
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msgid "**6. IdentifySecondaryObjects- Cells**"
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msgstr ""
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#: ../../source/AdvancedSegmentation/BBBC022_AnalysisExercise.md:207
@@ -281,7 +281,7 @@ msgid "Examine the segmentation and adjust the segmentation parameters until you
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msgstr ""
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#: ../../source/AdvancedSegmentation/BBBC022_AnalysisExercise.md:218
284-
msgid "7. **Test the robustness of your segmentation parameters across multiple compounds**"
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msgid "**7. Test the robustness of your segmentation parameters across multiple compounds**"
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msgstr ""
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#: ../../source/AdvancedSegmentation/BBBC022_AnalysisExercise.md:220
@@ -317,7 +317,7 @@ msgid "Some hints on what to play with: \\- In both IdentifyPrimaryObjects and
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#: ../../source/AdvancedSegmentation/BBBC022_AnalysisExercise.md:262
320-
msgid "8. **IdentifyTertiaryObjects- Cytoplasm**"
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msgid "**8. IdentifyTertiaryObjects- Cytoplasm**"
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msgstr ""
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#: ../../source/AdvancedSegmentation/BBBC022_AnalysisExercise.md:264
@@ -333,7 +333,7 @@ msgid "**Segment Nucleoli inside the Nuclei**"
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msgstr ""
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#: ../../source/AdvancedSegmentation/BBBC022_AnalysisExercise.md:272
336-
msgid "9. **Examine the steps used to segment the Nucleoli**"
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msgid "**9. Examine the steps used to segment the Nucleoli**"
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msgstr ""
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#: ../../source/AdvancedSegmentation/BBBC022_AnalysisExercise.md:274
@@ -365,7 +365,7 @@ msgid "**Segment the Mitochondria inside the Cytoplasm**"
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msgstr ""
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#: ../../source/AdvancedSegmentation/BBBC022_AnalysisExercise.md:311
368-
msgid "10. **Mask the Mito image by the Cytoplasm object**"
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msgid "**10. Mask the Mito image by the Cytoplasm object**"
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msgstr ""
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#: ../../source/AdvancedSegmentation/BBBC022_AnalysisExercise.md:313
@@ -393,7 +393,7 @@ msgid "*Figure 7: The MaskedMito image contains only the regions of interest.*"
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msgstr ""
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#: ../../source/AdvancedSegmentation/BBBC022_AnalysisExercise.md:338
396-
msgid "12. **IdentifyPrimaryObjects- Mitochondria**"
396+
msgid "**11. IdentifyPrimaryObjects- Mitochondria**"
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msgstr ""
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#: ../../source/AdvancedSegmentation/BBBC022_AnalysisExercise.md:340
@@ -413,7 +413,7 @@ msgid "**Perform Measurements**"
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#: ../../source/AdvancedSegmentation/BBBC022_AnalysisExercise.md:353
416-
msgid "13. **Add measurement modules to your pipeline**"
416+
msgid "**12. Add measurement modules to your pipeline**"
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msgstr ""
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#: ../../source/AdvancedSegmentation/BBBC022_AnalysisExercise.md:355
@@ -477,7 +477,7 @@ msgid "**Relate Nucleoli and Mitochondria to their respective nuclei/cells**"
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#: ../../source/AdvancedSegmentation/BBBC022_AnalysisExercise.md:429
480-
msgid "14. Examine the settings of RelateObjects"
480+
msgid "**13. Examine the settings of RelateObjects**"
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#: ../../source/AdvancedSegmentation/BBBC022_AnalysisExercise.md:431
@@ -493,7 +493,7 @@ msgid "**Perform the analysis on ALL the images**"
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#: ../../source/AdvancedSegmentation/BBBC022_AnalysisExercise.md:442
496-
msgid "15. **Run the pipeline (optional)**"
496+
msgid "**14. Run the pipeline (optional)**"
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msgstr ""
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#: ../../source/AdvancedSegmentation/BBBC022_AnalysisExercise.md:444

internal_use/docs/_build/gettext/BeginnerSegmentation.pot

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@@ -8,7 +8,7 @@ msgid ""
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msgstr ""
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"Project-Id-Version: cellprofiler-tutorials \n"
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"Report-Msgid-Bugs-To: \n"
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"POT-Creation-Date: 2025-10-27 00:08+0000\n"
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"POT-Creation-Date: 2026-02-25 20:59+0000\n"
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"PO-Revision-Date: YEAR-MO-DA HO:MI+ZONE\n"
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"Last-Translator: FULL NAME <EMAIL@ADDRESS>\n"
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"Language-Team: LANGUAGE <LL@li.org>\n"
@@ -693,7 +693,7 @@ msgid "Start CellProfiler by double-clicking the desktop icon: <img src=\"./Tut
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#: ../../source/BeginnerSegmentation/CPbeginner_Segmentation.md:61
696-
msgid "Figure 2: **Main CellProfiler window**. To load images, drag and drop images into the right area. To load a pipeline (.ccpipe or .ccproj files), drag and drop the pipeline file into the left area."
696+
msgid "Figure 2: **Main CellProfiler window**. To load images, drag and drop images into the right area. To load a pipeline (.cppipe or .cpproj files), drag and drop the pipeline file into the left area."
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msgstr ""
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#: ../../source/BeginnerSegmentation/CPbeginner_Segmentation.md:64
@@ -745,11 +745,11 @@ msgid "**TIP** you can manually adjust brightness and contrast in the image disp
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#: ../../source/BeginnerSegmentation/CPbeginner_Segmentation.md:97
748-
msgid "3. [OPTIONAL STEP] Set up the input modules"
748+
msgid "**3. [OPTIONAL STEP] Set up the input modules**"
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msgstr ""
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#: ../../source/BeginnerSegmentation/CPbeginner_Segmentation.md:99
752-
msgid "*We suggest you skip this step for now, it will not affect the rest of the pipeline, as these modules have been properly set up in the starting pipeline (`segmentation_start.cpipe`).*"
752+
msgid "*We suggest you skip this step for now, it will not affect the rest of the pipeline, as these modules have been properly set up in the starting pipeline (`segmentation_start.cppipe`).*"
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#: ../../source/BeginnerSegmentation/CPbeginner_Segmentation.md:101

internal_use/docs/_build/gettext/QualityControl.pot

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@@ -8,7 +8,7 @@ msgid ""
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msgstr ""
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"Project-Id-Version: cellprofiler-tutorials \n"
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"Report-Msgid-Bugs-To: \n"
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"POT-Creation-Date: 2026-02-19 20:20+0000\n"
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"POT-Creation-Date: 2026-02-25 20:59+0000\n"
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"PO-Revision-Date: YEAR-MO-DA HO:MI+ZONE\n"
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"Last-Translator: FULL NAME <EMAIL@ADDRESS>\n"
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"Language-Team: LANGUAGE <LL@li.org>\n"
@@ -65,7 +65,7 @@ msgid "It is additionally expected that you are generally familiar with the tool
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#: ../../source/QualityControl/BBBC022_QualityControlExercise.md:49
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msgid "1. **Start the provided QC pipeline on the BBBC022 dataset**"
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msgid "**1. Start the provided QC pipeline on the BBBC022 dataset**"
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#: ../../source/QualityControl/BBBC022_QualityControlExercise.md:51
@@ -101,7 +101,7 @@ msgid "The pipeline should take about 10-15 minutes to run. At the end, three fi
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#: ../../source/QualityControl/BBBC022_QualityControlExercise.md:76
104-
msgid "2. **Examine the QC pipeline (~15 minutes)**"
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msgid "**2. Examine the QC pipeline (~15 minutes)**"
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#: ../../source/QualityControl/BBBC022_QualityControlExercise.md:78
@@ -190,7 +190,7 @@ msgid "**CellProfiler specific adjustments**: besides determining the location o
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#: ../../source/QualityControl/BBBC022_QualityControlExercise.md:153
193-
msgid "3. **Open the CellProfiler Analyst workspace and determine reasonable parameter cutoffs (~20 minutes)**"
193+
msgid "**3. Open the CellProfiler Analyst workspace and determine reasonable parameter cutoffs (~20 minutes)**"
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#: ../../source/QualityControl/BBBC022_QualityControlExercise.md:155
@@ -242,7 +242,7 @@ msgid "Look at some of the images inside the gate (you may need to click ‘Show
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#: ../../source/QualityControl/BBBC022_QualityControlExercise.md:214
245-
msgid "4. **Optional — use the PlateViewer tool to check for other features to gate on (~10 minutes)**"
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msgid "**4. Optional — use the PlateViewer tool to check for other features to gate on (~10 minutes)**"
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#: ../../source/QualityControl/BBBC022_QualityControlExercise.md:216
@@ -270,7 +270,7 @@ msgid "Once you have a measurement you'd like to gate based on, open that Histog
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#: ../../source/QualityControl/BBBC022_QualityControlExercise.md:242
273-
msgid "5. **Create filters based on the cutoffs you’ve determined (~10 minutes)**"
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msgid "**5. Create filters based on the cutoffs you’ve determined (~10 minutes)**"
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#: ../../source/QualityControl/BBBC022_QualityControlExercise.md:244
@@ -359,7 +359,7 @@ msgid "*Figure 3: Creating filters inside CPA*"
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#: ../../source/QualityControl/BBBC022_QualityControlExercise.md:320
362-
msgid "6. **Create classifier rules to distinguish good from bad images (~30 minutes)**"
362+
msgid "**6. Create classifier rules to distinguish good from bad images (~30 minutes)**"
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#: ../../source/QualityControl/BBBC022_QualityControlExercise.md:322
@@ -403,7 +403,7 @@ msgid "Save your training set for future reference if desired, then close CellPr
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#: ../../source/QualityControl/BBBC022_QualityControlExercise.md:362
406-
msgid "7. **Add quality control steps to an analysis pipeline (~15 minutes)**"
406+
msgid "**7. Add quality control steps to an analysis pipeline (~15 minutes)**"
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#: ../../source/QualityControl/BBBC022_QualityControlExercise.md:364

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