Small updates, link fixes (#106)

Author: bethac07

AdvancedSegmentation/BBBC022_Analysis_Final.cppipe

@@ -355,7 +355,7 @@ MeasureColocalization:[module_num:14|svn_version:'Unknown'|variable_revision_num
     Calculate the Rank Weighted Colocalization coefficients?:Yes
     Calculate the Overlap coefficients?:Yes
     Calculate the Manders coefficients using Costes auto threshold?:Yes
-    Method for Costes thresholding:Fast
+    Method for Costes thresholding:Faster
 
 MeasureObjectIntensity:[module_num:15|svn_version:'Unknown'|variable_revision_number:4|show_window:False|notes:[]|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
     Select images to measure:ER, Mito, Hoechst, Ph_golgi, Syto

AdvancedSegmentation/README.md

@@ -8,4 +8,4 @@ They are fields of U2OS cells (10 sites imaged in 5 channels), and
 represent 5 mock treated wells from a single 384 well plate experiment.
 
 The download bundle for this tutorial lives in a public google drive folder:
-https://drive.google.com/drive/folders/1t6h2e4ifjRISQaXvFg-Mr9mOfc0vET9C?usp=sharing
+https://drive.google.com/file/d/18YB8RhfFNKZmYFBd2I0mujJNkcxxEuIZ/view?usp=sharing

BeginnerSegmentation/Archive_EN.zip

@@ -239,7 +239,7 @@ MeasureColocalization:[module_num:14|svn_version:'Unknown'|variable_revision_num
     Calculate the Rank Weighted Colocalization coefficients?:Yes
     Calculate the Overlap coefficients?:Yes
     Calculate the Manders coefficients using Costes auto threshold?:No
-    Method for Costes thresholding:Fast
+    Method for Costes thresholding:Faster
 
 RelateObjects:[module_num:15|svn_version:'Unknown'|variable_revision_number:5|show_window:True|notes:['This module relates a larger "Parent object" to another smaller "Child object/s". In this case, this allows us to identify which Nucleoli belong to which Nuclei.', 'The output is a new object called NucleoliChildObjects that has all of the nucleoli belonging to a single nucleus ']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
     Parent objects:Nuclei

BeginnerSegmentation/Archive_ES.zip

@@ -3,15 +3,15 @@
 1. Gather all the necessary files in a folder. Give the folder a descriptive name with no spaces. Note that files > 25 MB (and especially >100 MB) may not be uploadable to GitHub. If your tutorial requires large files, please do the following: 
     1. Add the files to a folder with a descriptive name (no spaces)
     2. Zip the folder (on mac, right click > Compress...)
-    3. Add the .zip file to google drive in the `Outreach` > `Workshops_Webinars_Tutorials` folder on the shared g drive
+    3. Add the .zip file to google drive in the `Outreach` > `Workshops_Webinars_Tutorials`> `GithubLinkedTutorialFiles` folder on the shared g drive
     4. Make sure the folder is public and copy the link to share the folder to use for the download link later.
 
 2. Make a PR adding the folder of materials to the tutorial repo. In addition to the materials, please also 
     1) write a short description of the tutorial to add to the readme and
-    2) create a gif (tips on making one [here](https://docs.google.com/document/d/1G5odCSbX1fW8vReKH5ubgvWc1sIGquLisUe7t5pR7d8/edit#heading=h.kjidkmwv6jq3)) and add that gif to to the `assets` > `img` folder.
+    2) create a gif (tips on making one [here](https://docs.google.com/document/d/1G5odCSbX1fW8vReKH5ubgvWc1sIGquLisUe7t5pR7d8/edit#heading=h.kjidkmwv6jq3); in 2024 on Mac, Beth likes Gifski) and add that gif to to the `assets` > `img` folder.
     3) add the tutorial to the `internal_use/docs/source/index.rst` file, and the index file of whatever language that tutorial is in (ie if English, `internal_use/docs/source/toc_en/index.rst`)
 
-3. Update the readme with the description and gif. If there is an associated blogpost or video, please link that using the appropriate badge. If the tutorial is particularly geared toward beginners, add the beginner badge. If the tutorial is advanced such that a user should definitely do a beginner tutorial first, use the advanced badge. 
+3. Update the top-level readme with the description and gif. If there is an associated blogpost or video, please link that using the appropriate badge. If the tutorial is particularly geared toward beginners, add the beginner badge. If the tutorial is advanced such that a user should definitely do a beginner tutorial first, use the advanced badge. 
 
 ## Here's an example of what the markdown looks like for the Translocation tutorial: 
 ```

BeginnerSegmentation/Archive_PT.zip

@@ -40,11 +40,11 @@ This exercise will guide you through setting segmentation parameters that will b
 
 <img class="imggif" src="assets/img/advancedsegmentation.gif" alt="example segmentation" align="right" width="250">
 
-<a href="https://drive.google.com/file/d/1zB6Cye3nlXN3J4oc4r32upn175v0jYg_/view?usp=sharing" target="_blank"><img src="assets/img/download-button.png" alt="Download materials" width="140px"> </a> 
+<a href="https://drive.google.com/file/d/1qVaQiPZKqOPEsa62lYEpm7ot3th7ADqE/view?usp=sharing" target="_blank"><img src="assets/img/download-button.png" alt="Download materials" width="140px"> </a> 
 
 En español:
 
-<a href="https://drive.google.com/file/d/1s6GrMSBwoyu67-VCPDxz9okM518JsHHq/view?usp=sharing" target="_blank"><img src="assets/img/download-button-es.png" alt="Materiales para descargar" width="140px"></a>
+<a href="https://drive.google.com/file/d/1LlmSZif9gOyn31xPLftzpJSflMukEFZU/view?usp=sharing" target="_blank"><img src="assets/img/download-button-es.png" alt="Materiales para descargar" width="140px"></a>
 
 ## Translocation